PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp1221s0008.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 316aa    MW: 34899.5 Da    PI: 7.9755
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp1221s0008.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding60.24.5e-191461148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         rg WT+eEd +l+ +++q+G+++W++I++  g+ R++k+c++rw +yl
  Kaladp1221s0008.1.p 14 RGQWTPEEDNKLAAYIAQYGTKNWRLIPKNAGLQRCGKSCRLRWTNYL 61
                         89********************************************97 PP
2Myb_DNA-binding461.2e-1468110246
                          SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
      Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                          g +T  E++ +v+++   G++ W++Ia+ ++ gRt++++k++w++
  Kaladp1221s0008.1.p  68 GQFTDAEEQTIVKVHSVVGNR-WSLIAAQLP-GRTDNDVKNHWNT 110
                          789******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MGRIPCCEKD SVKRGQWTPE EDNKLAAYIA QYGTKNWRLI PKNAGLQRCG KSCRLRWTNY  60
LRPDLKHGQF TDAEEQTIVK VHSVVGNRWS LIAAQLPGRT DNDVKNHWNT KLKKKLSGMG  120
IDPVTHKPFS HLMAEIATTL NPPQVAHLAE AALGCFKDEM LHLLTKKPMD FQLQQSSAGQ  180
GNPFITNKIE QKEDTIEKIK LGLSRAIQEP GMIAASSKSH WGTSAGNFHG CFPESVPGFQ  240
YGGPSFGNSS PWNQSMCTGS TCTAGDQQGR FHDKLEDEIG QESEGGRDIR NSSAIFNSDC  300
VLWDLPSADL MNPMV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56110.11e-116MYB family protein