PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp1071s0001.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family B3
Protein Properties Length: 370aa    MW: 42121.3 Da    PI: 5.002
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp1071s0001.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.13.6e-14371151899
                          --HHH.HTT---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                   B3  18 lpkkfaeehggkkeesktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                          +p++f+++ gg + ++ ++++  + g   W vk+  ++ + +y +++GW eFv++n+L   D++vF+++  ++f+++vkvf+ 
  Kaladp1071s0001.1.p  37 VPRQFVRHLGGRPVGEYQMRVWGSAGsYCWIVKV--ERDGAEYCFKNGWPEFVEDNDLGYADVLVFSYE--EKFKFLVKVFDP 115
                          7*****888*9**********99888689*****..*******************************85..79999*****96 PP
2B345.41.5e-142703521398
                          TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                   B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                          ++ +++pk+ a e ++ ++++ +l+++d++ + W +kl+ +  +g++ lt+ W +F +++ LkegD++vF+++g++    +v++++
  Kaladp1071s0001.1.p 270 QHHMTIPKEIAVEKDLYSKSQSQLVVRDSKEKLWFMKLS-TAEDGSVNLTEKWASFYESHSLKEGDSCVFEFIGSRI--VHVQIIS 352
                          3559*******999666666679***************4.77778899***********************998444..4888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    
MQPAINRMQN LLLLRYHAKI SRNSPKTLHE IRLGSEVPRQ FVRHLGGRPV GEYQMRVWGS  60
AGSYCWIVKV ERDGAEYCFK NGWPEFVEDN DLGYADVLVF SYEEKFKFLV KVFDPSGLKR  120
NMPSLRGEEE EEEVAFETPL QSDGESEDGQ NMPMDFDEQP IFYVDEEGEC HVGAGGKRVQ  180
VSMETSHEES LCHMEVGGEK DKEGHGRMES TQKGSVGCSD MRGHGKVELT RKESLFWFED  240
KAKESIEERI APPLSSDRSR FIATWSSTWQ HHMTIPKEIA VEKDLYSKSQ SQLVVRDSKE  300
KLWFMKLSTA EDGSVNLTEK WASFYESHSL KEGDSCVFEF IGSRIVHVQI ISASNVMSHA  360
GVEDVLLRD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09780.11e-06B3 family protein