PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0964s0031.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | YABBY | ||||||||
Protein Properties | Length: 198aa MW: 21590.3 Da PI: 8.4996 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 225.6 | 1.3e-69 | 4 | 171 | 6 | 169 |
YABBY 6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesas.t 94 se+vCyv+CnfC+t+lavsvP ts++++vtvrCGhC++lls n+ + + ++ +++ + l ++ +n++ +++s+s + Kaladp0964s0031.1.p 4 GSERVCYVHCNFCDTVLAVSVPCTSMLNIVTVRCGHCANLLSANMGALLEPCSIQDLPQKQQQTGAEGALVTNATNVNYSSGSSSSSSpS 93 589*****************************************9999887777775444444443334444444444433333333212 PP YABBY 95 svssekl...senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169 + +++kl e+++ + p+ p +rP ekrqrvPsaynrfikeeiqrika+nP+ishreafsaaaknWahfP+ihfg Kaladp0964s0031.1.p 94 KCNTNKLsgsCESSESDQPHRLPPVRPMEKRQRVPSAYNRFIKEEIQRIKAGNPEISHREAFSAAAKNWAHFPHIHFG 171 3333444555455566667767779****************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MEVGSERVCY VHCNFCDTVL AVSVPCTSML NIVTVRCGHC ANLLSANMGA LLEPCSIQDL 60 PQKQQQTGAE GALVTNATNV NYSSGSSSSS SPSKCNTNKL SGSCESSESD QPHRLPPVRP 120 MEKRQRVPSA YNRFIKEEIQ RIKAGNPEIS HREAFSAAAK NWAHFPHIHF GMKKAKFVDQ 180 DQLASRDRSG QKSFGFN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 1e-64 | YABBY family protein |