PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0955s0002.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 266aa MW: 29246.1 Da PI: 9.377

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0955s0002.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.6	1.7e-19	15	60	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd+ l +v+q+G ++W+tI+r ++ gRt+k+c++rw + Kaladp0955s0002.1.p 15 KGPWSPEEDDALNTLVQQHGARNWSTISRSIP-GRTGKSCRLRWCNQ 60 79****************************.*********985 PP
2	Myb_DNA-binding	52.7	1e-16	69	111	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++eEde +++a++++G++ W+tIar + gRt++ +k++w++ Kaladp0955s0002.1.p 69 PFSQEEDETIIRAHARFGNK-WATIARFLT-GRTDNAIKNHWNST 111 89****************.****9.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MAMSCGRRDT SDRIKGPWSP EEDDALNTLV QQHGARNWST ISRSIPGRTG KSCRLRWCNQ 60 LSPQVQHRPF SQEEDETIIR AHARFGNKWA TIARFLTGRT DNAIKNHWNS TLKRKCSAVR 120 SGPEPTRPLK RSVSAGAAPV QFYPGSPSGS DSSESSNQGL VKMASLSEEL ETSLSLSLSL 180 PGQVADSAEL TQSPAVQMSV EQQIAKRIEA RMPENGPVGL TTEMMGVMQE MIRKEVRSYM 240 AGMEMCSSGF RDHMGLSRIG FSKID*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67300.1	1e-69	MYB family protein