PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0674s0160.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 291aa    MW: 31787.9 Da    PI: 5.9055
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0674s0160.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.64.5e-112361248
                         HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         ++++ ++lG++ W++Ia++++  Rt++++k++w+++l
  Kaladp0674s0160.1.p  2 IIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 36
                         5788899****.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MIIHLQALLG NRWAAIASYL PQRTDNDIKN YWNTHLKKKL RKLQSGGGDE NVEGQKCRPK  60
IESSISKGQW ERRLQTDIHT AKQALCEALS IENNPTKFVV PSESSNPVSL SSFSPTTTLL  120
TQTTTASSSS SSGVYASSTE NISKLLQNWM KKTPSAAAKS ESSDQNDRFS FSNNKIQPQK  180
QEGGGPTRSS SSSEGALSAT TTNTSGAFDS IFGVHNSDDE NANLVQDHQS TSLFNDADYK  240
PDMKHGKSPL HQQNEEAPLT LLEKWLFDEV NAPSQGLIDI SSLDDDSVFF *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47600.12e-39MYB family protein