PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0585s0001.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | YABBY | ||||||||
Protein Properties | Length: 202aa MW: 22561.9 Da PI: 8.1831 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 237 | 4.2e-73 | 20 | 185 | 4 | 170 |
YABBY 4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaae..shldeslkeelleelkveeenlksnvekees 91 s s+q+Cyv+Cn C+t+lavsvP ++lfk+vtvrCGhCt+llsvn++ aa ++ +++ ++ ++ + +ee++++++ +++ Kaladp0585s0001.2.p 20 PSLSDQLCYVHCNLCDTVLAVSVPGSCLFKTVTVRCGHCTNLLSVNMRGLLLPPAAPppHRHATNFFNNPHNLMAMEEMQTNMTLMNQLP 109 5789*******************************************9998544443103335556666777788888888888877766 PP YABBY 92 astsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 + +++ + + ++e +p +pp++rPPekrqrvPsaynrfikeeiqrika+nPdishreafsaaaknWahfP+ihfgl Kaladp0585s0001.2.p 110 NPNEQMM--MMPVQTEFMP-APPAVRPPEKRQRVPSAYNRFIKEEIQRIKAENPDISHREAFSAAAKNWAHFPHIHFGL 185 6655544..4455677777.7999*****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MSSSSASSFS PDHHTLHHTP SLSDQLCYVH CNLCDTVLAV SVPGSCLFKT VTVRCGHCTN 60 LLSVNMRGLL LPPAAPPPHR HATNFFNNPH NLMAMEEMQT NMTLMNQLPN PNEQMMMMPV 120 QTEFMPAPPA VRPPEKRQRV PSAYNRFIKE EIQRIKAENP DISHREAFSA AAKNWAHFPH 180 IHFGLLPDQP VRRSGSNLLP Q* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45190.1 | 2e-64 | YABBY family protein |