PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0550s0008.4.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

NAC

Protein Properties

Length: 409aa MW: 45483 Da PI: 7.002

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0550s0008.4.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	155.3	2.7e-48	22	146	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 pGfrF+Ptd+el+++yL++k+eg + ++ evi+evdi+++ePwdLp k+v ++++ew+fFs+r +ky++g +++r+t+ gyWkatgk+++ Kaladp0550s0008.4.p 22 PGFRFSPTDDELISYYLRQKMEGFEKSV-EVIPEVDICRHEPWDLPgKSVIQSDSEWFFFSPRGRKYPNGCQSKRTTEFGYWKATGKERN 110 9**********************999.99***********777777899******************************* PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 v+s + +++g+k+tLvf+ grapkg++t+W+mhey + Kaladp0550s0008.4.p 111 VKS-NANVIGTKRTLVFHLGRAPKGRRTEWIMHEYCM 146 .999***************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MGDISSSGEA QMSLVAASAR FPGFRFSPTD DELISYYLRQ KMEGFEKSVE VIPEVDICRH 60 EPWDLPGKSV IQSDSEWFFF SPRGRKYPNG CQSKRTTEFG YWKATGKERN VKSNANVIGT 120 KRTLVFHLGR APKGRRTEWI MHEYCMHGSS QDSLVVCRIR KNSDFCMSGS SHQDSASQGR 180 GLSMTSDNTN QAGFADVRSH PDGHMVGDGC LVVSDGERVD DGSSRKCNSS HDSYSIEQNG 240 DGFESDRKAP HEVSQPTSSS CHKDCNNDDF YAEILNDDIV KLFDESSLTT SPNHHPLVST 300 IFDSRTEQLP VTTATSSMGP KQGIARRRIR FDMTKLDIDE LEMHLNPPER PSVVSKFTAG 360 KLSGKLTLIL LIVATLLALC LWYPVTEMKH TACASLCKDP RARSVKSW*

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MGDISSSGEA QMSLVAASAR FPGFRFSPTD DELISYYLRQ KMEGFEKSVE VIPEVDICRH  60
EPWDLPGKSV IQSDSEWFFF SPRGRKYPNG CQSKRTTEFG YWKATGKERN VKSNANVIGT  120
KRTLVFHLGR APKGRRTEWI MHEYCMHGSS QDSLVVCRIR KNSDFCMSGS SHQDSASQGR  180
GLSMTSDNTN QAGFADVRSH PDGHMVGDGC LVVSDGERVD DGSSRKCNSS HDSYSIEQNG  240
DGFESDRKAP HEVSQPTSSS CHKDCNNDDF YAEILNDDIV KLFDESSLTT SPNHHPLVST  300
IFDSRTEQLP VTTATSSMGP KQGIARRRIR FDMTKLDIDE LEMHLNPPER PSVVSKFTAG  360
KLSGKLTLIL LIVATLLALC LWYPVTEMKH TACASLCKDP RARSVKSW*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27300.1	4e-86	NAC family protein