PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0488s0024.7.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

FAR1

Protein Properties

Length: 684aa MW: 78487.4 Da PI: 7.9421

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0488s0024.7.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.8	2.7e-21	76	159	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Yn YAke+GF vr+++s +++++e + + ++Cs +g+++ ++ + r r+etrtgC a++++++ ++++w++ ++ l+HnH l Kaladp0488s0024.7.p 76 NYYNCYAKEAGFCVRVKNSWFKRNSKEKYGAVLCCSSQGFKRIKDVN-----RLRKETRTGCPAMIRMRLVDSKRWRIVEVTLDHNHLL 159 69***************************************9988.....99*******************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 684 aa Download sequence
MEVISLGSEQ VLDIESNEAG LEREGGVVEL DGQSYKSLER DGLSELDGEN AACQPRKEFV 60 APAVGMEFES YDDVYNYYNC YAKEAGFCVR VKNSWFKRNS KEKYGAVLCC SSQGFKRIKD 120 VNRLRKETRT GCPAMIRMRL VDSKRWRIVE VTLDHNHLLG SRVHKSVKRL TNCTKRKLNS 180 NSDAEVRTIK LYHALVVDAG GDGSCNVIGR EARTQSSKPD QLCLKKGDSQ SVYNYFCRMQ 240 MSNSNFFHSV DFNVDGLLRN VFWADARSRA ACGYFGDVVR FDSTYLSSKY ETPLVTFVGL 300 NHHGQSVLLG CGLLSNETTE SYVWIFKTWA ACMNGHTPQT IITDRCLCLQ TAISQVFPRS 360 HHRFGLFDIM RRVPEKLGGL RNYDAIRKAL FKAVYETLKV GEFEGAWGFM VHHFGVADNE 420 WLQSLYKDRV LWAPVCLKDT FFAGIAAASQ GDNISPFFDK YVHKQTPLKE FLDKYEFAVQ 480 KKHKEESLAD IESRNWTPIL KSRCSFELQV SKAYTKEMFN KFQFEVEEMY SCFSTMQLHV 540 NGPITIFLVK ERILVEGNRR EIRDFEVMYN RSASEVRCIC SCFNFNGYLC RHSLCVLNFN 600 GVEEIPSKYI LPRWRKDYKR VYIPISCSNG LNLTDQAQFF NQLYRSALQV VEEGVVSFDH 660 YKVALEAFEE SLNRIHGLEE KLD*

Sequence ? help Back to Top

Protein Sequence Length: 684 aa Download sequence

MEVISLGSEQ VLDIESNEAG LEREGGVVEL DGQSYKSLER DGLSELDGEN AACQPRKEFV  60
APAVGMEFES YDDVYNYYNC YAKEAGFCVR VKNSWFKRNS KEKYGAVLCC SSQGFKRIKD  120
VNRLRKETRT GCPAMIRMRL VDSKRWRIVE VTLDHNHLLG SRVHKSVKRL TNCTKRKLNS  180
NSDAEVRTIK LYHALVVDAG GDGSCNVIGR EARTQSSKPD QLCLKKGDSQ SVYNYFCRMQ  240
MSNSNFFHSV DFNVDGLLRN VFWADARSRA ACGYFGDVVR FDSTYLSSKY ETPLVTFVGL  300
NHHGQSVLLG CGLLSNETTE SYVWIFKTWA ACMNGHTPQT IITDRCLCLQ TAISQVFPRS  360
HHRFGLFDIM RRVPEKLGGL RNYDAIRKAL FKAVYETLKV GEFEGAWGFM VHHFGVADNE  420
WLQSLYKDRV LWAPVCLKDT FFAGIAAASQ GDNISPFFDK YVHKQTPLKE FLDKYEFAVQ  480
KKHKEESLAD IESRNWTPIL KSRCSFELQV SKAYTKEMFN KFQFEVEEMY SCFSTMQLHV  540
NGPITIFLVK ERILVEGNRR EIRDFEVMYN RSASEVRCIC SCFNFNGYLC RHSLCVLNFN  600
GVEEIPSKYI LPRWRKDYKR VYIPISCSNG LNLTDQAQFF NQLYRSALQV VEEGVVSFDH  660
YKVALEAFEE SLNRIHGLEE KLD*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	0.0	FAR1 family protein