PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0457s0021.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | C2H2 | ||||||||
Protein Properties | Length: 251aa MW: 27513.7 Da PI: 6.6085 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.2 | 0.00027 | 100 | 122 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H Kaladp0457s0021.1.p 100 FSCNYCRRKFYSSQALGGHQNAH 122 89*****************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MDLNMMAVPS NSDSEDESEI NNLVGSSNPS IPDSYFKCHD SIRDSSCLPN LRNSSHLNHE 60 AVSLNLTLHS NASKPIDDGS DPGTELATQP PQVPRIQRLF SCNYCRRKFY SSQALGGHQN 120 AHKRERTMAK RAMKMGVFSH RYASLLSLPI HSHHGFGAMG LEAHALTHQS LGPPPPCLYE 180 NNIHGFEHGG VPFFPEEDVG ELPWPGSFRP HDDSNNLLSE TEKSLPTHFA AMAAPVRSSS 240 SPIPDLTLRL * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G24625.1 | 4e-33 | C2H2 family protein |