PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0457s0011.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 642aa MW: 69417.6 Da PI: 9.6058

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0457s0011.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16	3.4e-05	73	95	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H Kaladp0457s0011.1.p 73 FICEVCNKGFQREQNLQLHRRGH 95 89*******************88 PP
2	zf-C2H2	12.3	0.0005	149	171	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ Kaladp0457s0011.1.p 149 WKCEKCSKKYAVQSDWKAHSKTC 171 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 642 aa Download sequence
MSSFFGGARE DDQSHHHLQM LQQQQLQPQQ QQQNSSSLPA PQGKKKRNLP GTPNPDAEVI 60 ALSPKSLMAT NRFICEVCNK GFQREQNLQL HRRGHNLPWK LKQKSNKEVK KKVYLCPEPT 120 CVHHDPSRAL GDLTGIKKHY SRKHGEKKWK CEKCSKKYAV QSDWKAHSKT CGTREYRCDC 180 GTLFSRRDSF ITHRAFCDAL AQESARHPTG LSSIGSHIYG ASASRSSLGL DFQVGTQMQS 240 NNMLRLGNAM EPAKFDHHSL TMPPNNSNPF GQHQQMPSPS SIFMNDPNTN QGGFQEQSHQ 300 QGLMIPNKAL FHGMMNLSDH HDQSPNSASA SSMFNLGFYP NGTPNRSMNN NPSNSSNNNM 360 SSSSGFLSSD DQFNIGISAN NVSGGGGSQP TSTNLFSSTL GNNLSSGNLN SIYGNPSLQH 420 ENLTPHMSAT ALLQKAAQIG STSSASNSST LLRGLAVSSN PAAKSDSAQQ LISPAGNISG 480 SSNSSRTAFA PNGGTLKPAL MDNDTHFQGL INSLTNGSSS IFGDQNSYTG FGDADQNNNN 540 MGLDRNLHQQ QLNNNASFGS SAEANKLQQN LVRGSDKLTL DFLGVGGIVR NNMNAASAAA 600 ASGFLHREQQ QQQLQQNQQG VDGRSLESAR ANLPFGSAKF H*

Sequence ? help Back to Top

Protein Sequence Length: 642 aa Download sequence

MSSFFGGARE DDQSHHHLQM LQQQQLQPQQ QQQNSSSLPA PQGKKKRNLP GTPNPDAEVI  60
ALSPKSLMAT NRFICEVCNK GFQREQNLQL HRRGHNLPWK LKQKSNKEVK KKVYLCPEPT  120
CVHHDPSRAL GDLTGIKKHY SRKHGEKKWK CEKCSKKYAV QSDWKAHSKT CGTREYRCDC  180
GTLFSRRDSF ITHRAFCDAL AQESARHPTG LSSIGSHIYG ASASRSSLGL DFQVGTQMQS  240
NNMLRLGNAM EPAKFDHHSL TMPPNNSNPF GQHQQMPSPS SIFMNDPNTN QGGFQEQSHQ  300
QGLMIPNKAL FHGMMNLSDH HDQSPNSASA SSMFNLGFYP NGTPNRSMNN NPSNSSNNNM  360
SSSSGFLSSD DQFNIGISAN NVSGGGGSQP TSTNLFSSTL GNNLSSGNLN SIYGNPSLQH  420
ENLTPHMSAT ALLQKAAQIG STSSASNSST LLRGLAVSSN PAAKSDSAQQ LISPAGNISG  480
SSNSSRTAFA PNGGTLKPAL MDNDTHFQGL INSLTNGSSS IFGDQNSYTG FGDADQNNNN  540
MGLDRNLHQQ QLNNNASFGS SAEANKLQQN LVRGSDKLTL DFLGVGGIVR NNMNAASAAA  600
ASGFLHREQQ QQQLQQNQQG VDGRSLESAR ANLPFGSAKF H*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	2e-96	C2H2 family protein