PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0262s0034.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

SBP

Protein Properties

Length: 353aa MW: 38690.4 Da PI: 8.2692

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0262s0034.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.2	3.5e-41	200	277	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+egC+adls+ak+yhrrhkvCe+hsk+++v++ gl+qrfCqqCsrfh l+efD++krsCr+rLa+hn+rrrk+ + Kaladp0262s0034.1.p 200 RCQAEGCAADLSNAKHYHRRHKVCEFHSKSATVIAGGLTQRFCQQCSRFHLLTEFDNGKRSCRKRLADHNRRRRKTPQ 277 6**************************************************************************865 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MLEYEPWGNP SQMILGSAED DPAQVVSDHH GIDIFNTNGN SSNGHHSALS LDYAQAAAAT 60 DPHHHHHQGV TFSSSPNLNA FSQHHHHHHQ FFNADHQAAS LNALYDPRAF PSSYAPQHHF 120 DAALTGLNPN SAHPGGAGYF LVPKTEEGAA AGRQQGTRIG LNLGHRTYFS AQDDDFVNRL 180 YRRSRPGGMD ACGGSVNAPR CQAEGCAADL SNAKHYHRRH KVCEFHSKSA TVIAGGLTQR 240 FCQQCSRFHL LTEFDNGKRS CRKRLADHNR RRRKTPQQPS GQGQLELQKS PMDNSSSETL 300 TKSPPESSAL THPSSSVTIA ISPPRMTLEC FRQRSYREMA SSSSSSSVFY SN*

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MLEYEPWGNP SQMILGSAED DPAQVVSDHH GIDIFNTNGN SSNGHHSALS LDYAQAAAAT  60
DPHHHHHQGV TFSSSPNLNA FSQHHHHHHQ FFNADHQAAS LNALYDPRAF PSSYAPQHHF  120
DAALTGLNPN SAHPGGAGYF LVPKTEEGAA AGRQQGTRIG LNLGHRTYFS AQDDDFVNRL  180
YRRSRPGGMD ACGGSVNAPR CQAEGCAADL SNAKHYHRRH KVCEFHSKSA TVIAGGLTQR  240
FCQQCSRFHL LTEFDNGKRS CRKRLADHNR RRRKTPQQPS GQGQLELQKS PMDNSSSETL  300
TKSPPESSAL THPSSSVTIA ISPPRMTLEC FRQRSYREMA SSSSSSSVFY SN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	4e-72	SBP family protein