PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0255s0012.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

TCP

Protein Properties

Length: 361aa MW: 40420.6 Da PI: 7.1941

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0255s0012.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	125.5	5.7e-39	151	305	4	132
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.........ssssa..sec...eaesss 79 k rhski T++g+RdRR+Rls+++a+rfF Lqd+LGfdk+s t+eWLl +++ +i + +g +s s c e++s++ Kaladp0255s0012.1.p 151 TKGRHSKIDTAQGPRDRRMRLSLDIARRFFGLQDMLGFDKASRTVEWLLSKSQFEINKVAGRkdndafnsaKS--DsfSPCecgEEVSEV 238 588*********************************************************88887765422..234555446666666 PP TCP 80 ssasnsssg.............kaaksaa..kskksqksaasalnlak.esrakarararertrekmri 132 +++n s++ + ++++ k + +++++ +++la+ esr+karararert+ek++i Kaladp0255s0012.1.p 239 DNKDNLSQSgamdtdketkksrS-KEKKIrgKVSVPSRKNG-FNHLANkESREKARARARERTKEKKMI 305 66664444477888888877542.22222123333333333.4444445***************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MFPTPDNNDS NSFAVPYSDH QYLFYSKLLD DVHIDNNYQN PACSPFSSFG LHFHADPPPP 60 FLYSSDHHEH PLQIQDNPGE EQLPRVTIHQ EFITAASSSS SARGYCTADE NFLQSGFAGD 120 GDPTDGIGGT SAVRPVKQHD DTVRNNGILL TKGRHSKIDT AQGPRDRRMR LSLDIARRFF 180 GLQDMLGFDK ASRTVEWLLS KSQFEINKVA GRKDNDAFNS AKSDSFSPCE CGEEVSEVDN 240 KDNLSQSGAM DTDKETKKSR SKEKKIRGKV SVPSRKNGFN HLANKESREK ARARARERTK 300 EKKMICHSQS YSKQQQFLNP EPHTYSYVDQ GHMMTDQDGS LANSTCWNPS STCTTIVNRL 360 *

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MFPTPDNNDS NSFAVPYSDH QYLFYSKLLD DVHIDNNYQN PACSPFSSFG LHFHADPPPP  60
FLYSSDHHEH PLQIQDNPGE EQLPRVTIHQ EFITAASSSS SARGYCTADE NFLQSGFAGD  120
GDPTDGIGGT SAVRPVKQHD DTVRNNGILL TKGRHSKIDT AQGPRDRRMR LSLDIARRFF  180
GLQDMLGFDK ASRTVEWLLS KSQFEINKVA GRKDNDAFNS AKSDSFSPCE CGEEVSEVDN  240
KDNLSQSGAM DTDKETKKSR SKEKKIRGKV SVPSRKNGFN HLANKESREK ARARARERTK  300
EKKMICHSQS YSKQQQFLNP EPHTYSYVDQ GHMMTDQDGS LANSTCWNPS STCTTIVNRL  360
*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	1e-23	TCP family protein