PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0207s0002.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family YABBY
Protein Properties Length: 219aa    MW: 24449.1 Da    PI: 8.4133
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0207s0002.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY236.65.6e-73201854170
                YABBY   4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaae..shldeslkeelleelkveeenlksnvekees 91 
                           s s+q+Cyv+Cn C+t+lavsvP ++lfk+vtvrCGhCt+llsvn++      aa   ++  +++ ++ ++ + +ee++++++ +++  
  Kaladp0207s0002.1.p  20 PSLSDQLCYVHCNLCDTVLAVSVPGSCLFKTVTVRCGHCTNLLSVNMRGLLLPPAAPppHRHATNFFNNPHNLMAMEEMQTNMTLMNQLP 109
                          5789*******************************************9998544443103335556666777788888888888877766 PP

                YABBY  92 astsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                          + +++ +  +   ++e +p +pp++rPPekrqrvPsaynrfikeeiqrika+nPdishreafsaaaknWahfP+ihfgl
  Kaladp0207s0002.1.p 110 NPNEQMM--MMPLQTEFMP-APPAVRPPEKRQRVPSAYNRFIKEEIQRIKAENPDISHREAFSAAAKNWAHFPHIHFGL 185
                          6655544..4455677777.7999*****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MSSSSASSFS PDHHTLHHTP SLSDQLCYVH CNLCDTVLAV SVPGSCLFKT VTVRCGHCTN  60
LLSVNMRGLL LPPAAPPPHR HATNFFNNPH NLMAMEEMQT NMTLMNQLPN PNEQMMMMPL  120
QTEFMPAPPA VRPPEKRQRV PSAYNRFIKE EIQRIKAENP DISHREAFSA AAKNWAHFPH  180
IHFGLLPDQP VRRSGSNLLP QRRGAAEGRL LMTDGFLQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.17e-68YABBY family protein