PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0101s0259.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ZF-HD
Protein Properties Length: 294aa    MW: 31849.7 Da    PI: 9.3588
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0101s0259.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer90.91.2e-284493357
          ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57
                         +  YkeC+kNhAa++Ggha+DGCgE+mp       + +l+CaACgCHRnFHR e+
  Kaladp0101s0259.2.p 44 TPSYKECQKNHAAAIGGHALDGCGEYMPP-----PSPSLQCAACGCHRNFHRPET 93
                         568*************************9.....4579**************886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MDSGMVAVKM SSDQQAQAQR LCFKALSFSG KRERSRNEHQ AHETPSYKEC QKNHAAAIGG  60
HALDGCGEYM PPPSPSLQCA ACGCHRNFHR PETPSAAAGV ESRMKTVAAA PIFSHRPRRF  120
SSTSPSSSSS PSRSEAPISS IYPSAPQILM TLSSGVEMTS AHTTTTTTAP DTIKLCFGED  180
GKMGKPRKRF RTKFSAEQKE KMRMFAEGFG WKMQRSDEDV VKRFCDEIGV CRSVLKVWMH  240
NNKSRNSTGI NSNNTFDYNG GGLNGDRVDS EEMHLAGING GKQSTHGGSS SSV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69600.13e-45ZF-HD family protein