PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0101s0194.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family B3
Protein Properties Length: 212aa    MW: 24839.7 Da    PI: 10.1536
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0101s0194.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B358.89.4e-1932118799
                          .-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                   B3   7 psdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                          + ++++++ l++pkkf  ++ +k   + t++l+ ++g  W+vk+   k+ + ++l+kGW +Fv ++ L+e D +vF+++g+s+f   v++
  Kaladp0101s0194.2.p  32 QIMANSNSELRVPKKFGMKFPMK--LGETIKLRGPTGDIWRVKV--VKTEEDVLLRKGWPRFVYDHLLNEYDLLVFRYTGSSSF--DVSI 115
                          556788899********999877..7779***************..**********************************9999..9999 PP

                          E-S CS
                   B3  97 frk 99 
                          f++
  Kaladp0101s0194.2.p 116 FDR 118
                          998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MAEMDEREET SRAMEEQIYW NQFESTKHHF FQIMANSNSE LRVPKKFGMK FPMKLGETIK  60
LRGPTGDIWR VKVVKTEEDV LLRKGWPRFV YDHLLNEYDL LVFRYTGSSS FDVSIFDRNA  120
CVKDLRMLQD RFESKPHFFK VMNQEFRSKL LIPKKLRIGF VEKMGNTIRL KGPSGYVWKV  180
GAERAGEDII LGIGVRRRAH TLSSQQLDQQ I*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.18e-19B3 family protein