PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0099s0106.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GATA
Protein Properties Length: 358aa    MW: 38764.5 Da    PI: 6.861
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0099s0106.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA572.6e-18264297134
                 GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                          C++C  tkTp+WR gp g+ktLCnaCG+++++ +
  Kaladp0099s0106.1.p 264 CQHCEITKTPQWRAGPMGPKTLCNACGVRFKSGR 297
                          *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MAGAGPSFAD DLDCVNFFDQ IDDLLDFPDE SCKNNGESGI LCEDFKDFPS VWTQSDPFPA  60
SESVFSGSNS NSTSDLSAEL SVPYEDIAEL EWLSTFVEDS FSAGNSLTID VTNSVSNKVV  120
SPSPNQFQTS SPVSVLESSS SSYGGGKVMP VIPFKPAAMT GGRCGRARSK RPRPSTFNPR  180
PSMQLMSPNA SFTKTATPFE GVRTGCAEFN SFSELGHSLK IPKSSASMEC KKKKKMKLSV  240
PRPAEVNQNE NPNPLSPQVA VRKCQHCEIT KTPQWRAGPM GPKTLCNACG VRFKSGRLFP  300
EYRPAASPTF VPSVHSNSHK KVLEMRVKTC NRTGSPPSFE TLQTELVPNE NNVADYV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1170174KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.26e-42GATA family protein