PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0099s0085.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

AP2

Protein Properties

Length: 478aa MW: 52184.1 Da PI: 9.5421

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0099s0085.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.8	5e-17	143	192	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g Kaladp0099s0085.1.p 143 SPYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 192 68*****************......55**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MFDLNIHYSH HHQSPHPSST DSAATSSSSV IVNSTSAGDE DSASINNHTS APPSTLFFDI 60 LNRDHENPVP VAGAGLVART LFPSAVESSS SPAVVPQWLN LSFADSASSH SELCSLQQPN 120 HHNLQQLKPV GKKSRRGPRS RSSPYRGVTF YRRTGRWESH IWDCGKQVYL GGFDTAHAAA 180 RAYDRAAIKF RGVDADINFD LKDYDNDMKQ MAELSKEEFV HVLRRQSTGF ARSSSKYKGV 240 TLHKYGRPDH AGLGQALAQS FYPVVFDREA AFARYNEGEA VTNTEANTYP RGYLTLNPIN 300 KGSDGTLDLS LGITPTSNNS CPTGTNITAI PGLPAYARHG RDRDMFNASA VRVLCGQPSS 360 HGFTNPSPTV WQFQQHPSNP AHMPQIKTAT MERRMSITNT PQRFPDWAVR VPIGRGGSIT 420 APMQLLSSAA SSGFPTGVVP TAPTRIASAI PLSKSPSNND VVYYNYRTIQ MNSFPYR*

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MFDLNIHYSH HHQSPHPSST DSAATSSSSV IVNSTSAGDE DSASINNHTS APPSTLFFDI  60
LNRDHENPVP VAGAGLVART LFPSAVESSS SPAVVPQWLN LSFADSASSH SELCSLQQPN  120
HHNLQQLKPV GKKSRRGPRS RSSPYRGVTF YRRTGRWESH IWDCGKQVYL GGFDTAHAAA  180
RAYDRAAIKF RGVDADINFD LKDYDNDMKQ MAELSKEEFV HVLRRQSTGF ARSSSKYKGV  240
TLHKYGRPDH AGLGQALAQS FYPVVFDREA AFARYNEGEA VTNTEANTYP RGYLTLNPIN  300
KGSDGTLDLS LGITPTSNNS CPTGTNITAI PGLPAYARHG RDRDMFNASA VRVLCGQPSS  360
HGFTNPSPTV WQFQQHPSNP AHMPQIKTAT MERRMSITNT PQRFPDWAVR VPIGRGGSIT  420
APMQLLSSAA SSGFPTGVVP TAPTRIASAI PLSKSPSNND VVYYNYRTIQ MNSFPYR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	4e-58	AP2 family protein