PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0098s0074.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family B3
Protein Properties Length: 463aa    MW: 52439.5 Da    PI: 7.3147
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0098s0074.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.11.6e-132099797
                         .-HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                   B3  7 psdvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
                         +sd  ++  + +p +f++  +g+  e     l++ ++ r W v++   +++    + +GW+eFv++n+L +g+++vF++dg ++f   v+vf
  Kaladp0098s0074.1.p 20 TSDLATN--FLIPADFCKYLEGQRGE--AAELRSrRRRRPWPVRI--VGRR----IVDGWEEFVRENELHVGEILVFRYDGGMCF--DVTVF 99
                         5555555..79******555888555..67777846779******..7777....889**********************99*99..77776 PP
2B340.54.9e-131562381498
                          T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                   B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                          + l +p +f+ ++++kk++s  ++++de+g+sW vkl ++k +++++ ++GW +F k+ g++eg+ +  ++++ +++++v++++r
  Kaladp0098s0074.1.p 156 RSLFFPVPFILDNQLKKARS-GIVVRDEKGKSWPVKLGFKKWGNAVYTRDGWYSFIKETGIREGEDFEVRVIS-QGRKPVLTFRR 238
                          33789**********99998.9******************************************998888776.66667777665 PP
3B3469.5e-15360448996
                          HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                   B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                           + +++rlv+  +fa++++++++++  ++l++++g+ W  +l+y  +k++++y++++GWkeF+ +ngL +g  + ++ ++ ++ +l++k+
  Kaladp0098s0074.1.p 360 PMIERSRLVVGVEFARANDLINKCG-SIILKNQKGEPWAATLKYtkKKTQDSYYISAGWKEFALSNGLGVGCQFKLEIEQPESDTLTFKL 448
                          567899************9998777.9*****************64555555*******************9988887766888788776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 463 aa     Download sequence    
MADEERSQFP TGPHFLQPVT SDLATNFLIP ADFCKYLEGQ RGEAAELRSR RRRRPWPVRI  60
VGRRIVDGWE EFVRENELHV GEILVFRYDG GMCFDVTVFG PSACEKEFPP LATSPAAADE  120
NLELEETAAI RGDGLNCPPQ AGTDSYVGTM KPSYLRSLFF PVPFILDNQL KKARSGIVVR  180
DEKGKSWPVK LGFKKWGNAV YTRDGWYSFI KETGIREGED FEVRVISQGR KPVLTFRRIS  240
NEENSRVSEF ENRQKADQVS EPKIEPIMRQ MADQAREPEM EPMPKPANRQ EAEEVRVPET  300
EWVATPAKNQ KTIEVPVPET EWVATSAKRH KVQGHTLTEQ KTDSPRAVRC TYFYATSTWP  360
MIERSRLVVG VEFARANDLI NKCGSIILKN QKGEPWAATL KYTKKKTQDS YYISAGWKEF  420
ALSNGLGVGC QFKLEIEQPE SDTLTFKLSE CLPGKLRVGD SA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00260.14e-32B3 family protein