PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0095s0568.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 364aa MW: 40299.9 Da PI: 7.3254 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.1 | 7.1e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++ +G+g+W++++ g+ R+ k+c++rw +yl Kaladp0095s0568.1.p 14 KGPWTPEEDIILVSYIQDHGPGNWRSVPTNTGLLRCSKSCRLRWTNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 49 | 1.4e-15 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T +E++ ++++ ++lG++ W++Ia++++ Rt++++k++w+++l Kaladp0095s0568.1.p 67 RGNFTDQEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 112 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 364 aa Download sequence |
MGRPPCCDKL GVKKGPWTPE EDIILVSYIQ DHGPGNWRSV PTNTGLLRCS KSCRLRWTNY 60 LRPGIRRGNF TDQEEKMIIH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKLKKLQ 120 SGTNDSSQDD NSSSSSASRH TAPKGQWERR LQTDIHLAKQ ALCEALSLDK PIYETADKSH 180 SPHQPASNSN NLNLLLTPTP TSIMGVTQSP SMPATTTYAS NAENIARLLE NWSKKKSSSF 240 GSASNQMTII NSGAVSQNYS LKSQEHQQHV GSSSCSEGTL SSTTPDQFES IFDNSNNVTL 300 HHDSTLMYQA ESKPLNMEDQ APQMPLTLLE KWLLFDDGTN NGITSQGQDG LLDMSLDGNS 360 VFF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47600.1 | 1e-100 | MYB family protein |