PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0095s0414.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 274aa    MW: 31447.7 Da    PI: 8.5884
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0095s0414.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF79.71.9e-251059251
                         ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         ri+n + rqvtfskRrng+lKKA+EL +LCdaev v++fsstgk+++++s
  Kaladp0095s0414.1.p 10 RIDNPTSRQVTFSKRRNGLLKKANELAILCDAEVGVMVFSSTGKVHDFAS 59
                         8***********************************************86 PP
2K-box73.75.4e-2578169898
                K-box   8 s.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 
                          +  ++++ + +q+e+a L++++++Lq+++R+l+ +dL+ L +k+Lq Le++L+ksl++iR++K++ll+++i el  k + +++en +L +
  Kaladp0095s0414.1.p  78 QlDSSSEIKFWQREAATLRQQLQSLQESHRQLMRDDLSGLGIKDLQDLETHLDKSLRSIRTTKDKLLMDEILELNAKGNIVRQENLELYQ 167
                          24678999********************************************************************************99 PP

                K-box  97 kl 98 
                          k+
  Kaladp0095s0414.1.p 168 KV 169
                          96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MGRGKVVIRR IDNPTSRQVT FSKRRNGLLK KANELAILCD AEVGVMVFSS TGKVHDFASS  60
SMTSVIDRYS KSKEEQQQLD SSSEIKFWQR EAATLRQQLQ SLQESHRQLM RDDLSGLGIK  120
DLQDLETHLD KSLRSIRTTK DKLLMDEILE LNAKGNIVRQ ENLELYQKVY GTKDVHAQCS  180
SITPISRHDL NIGEDAHVPV ELQLCQPQNQ NYETRTRATK LGYLFLKYIN RYYFIKNPHK  240
MNLVGCISQQ TIFAIVEAAK WEDETNDFHQ DVK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37940.12e-81MIKC_MADS family protein