PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0095s0014.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 281aa    MW: 31441.7 Da    PI: 6.5133
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0095s0014.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF78.16.2e-2560110151
                          S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                          k+i+n++ rqvtfskRr g++KKAeEL vLCd +v +++fsstgk +eys+
  Kaladp0095s0014.1.p  60 KKIDNTTARQVTFSKRRRGLFKKAEELAVLCDSDVGLVVFSSTGKCFEYSN 110
                          68***********************************************95 PP
2K-box41.65.1e-151462252099
                K-box  20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                          +++kL +e+ +  + +R++ Ge+Le + +++LqqLe+ Le +l++i ++K   ++++i el +k  +l een+ Lr++++
  Kaladp0095s0014.1.p 146 NYTKLGQEVAEKSSLLRRYRGENLEGMGIEDLQQLEKCLEAGLSRIIETKGGKIMREICELENKGMRLMEENEVLRQQVA 225
                          6788888888888999*************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MFLHFDWLAS LSLSLSLFSP HPENTVGSNC NGGHGSSTPA ARLEREKRVS EMAREKIQIK  60
KIDNTTARQV TFSKRRRGLF KKAEELAVLC DSDVGLVVFS STGKCFEYSN CGMQQILERH  120
HLQSKNLEKL QQPAPSLELQ LVEDVNYTKL GQEVAEKSSL LRRYRGENLE GMGIEDLQQL  180
EKCLEAGLSR IIETKGGKIM REICELENKG MRLMEENEVL RQQVARIPNV YIPHRANSEN  240
RMCEDGQSSE SVTNLCISGG ASQDYESSDI SLRLGLPYSG *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.11e-97MIKC_MADS family protein