PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0094s0054.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C3H
Protein Properties Length: 417aa    MW: 46193.9 Da    PI: 6.3484
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0094s0054.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH23.59.6e-08166186526
                          --SGGGGTS--TTTTT-SS-SS CS
              zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                           C++f++ G C+ Gd C FaHg
  Kaladp0094s0054.1.p 166 ACPDFRK-GNCRKGDACEFAHG 186
                          7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    
MQNTHLSCLH IPGQSFSINN NIAQHSMMLG DYKFSSTSSS LHVPPWSSLA VDDPFSPLPA  60
NMNFISADGS PASFSDSAYA SLRRYLPSND ADIDGDVELL DYLGVDAEEE EFPLDAYSCD  120
QFRMFDFKVR RCVRAKSHDW TECPYAHPGE KARRRDPRKY NYAGTACPDF RKGNCRKGDA  180
CEFAHGVFEC WLHPNRYRTQ PCKDGVNCRR RVCFFAHTPD QLRVVTESSP RSVVDSYDGS  240
PLRQALEAAV TKSAMPLMLS ISPPATPTAD SPPVSPLTRS LSRSLGSSSV NELVVSLRQL  300
QLNKQVKSMP RASYNLPGYG GSPRGSSLLK PGFFSLPNTP TGIQTRGVAG RHLELWERSV  360
EEEEDLEPAM ERVESGRCLR AKMLEKLRND NSLMDPAAEC SSTPDPDVGW VSELLQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.11e-107C3H family protein