PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0094s0011.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 240aa MW: 27259 Da PI: 9.3488 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 94.3 | 5.4e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr g+lKKA+E+SvLCdaeva+i+fs++gkl++y++ Kaladp0094s0011.1.p 9 KRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFDYAT 59 79***********************************************86 PP | |||||||
2 | K-box | 99.9 | 3.5e-33 | 81 | 174 | 7 | 100 |
K-box 7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 ++++ + s++ e+a+Lk++ie L+++qRh++GedL+sL lkeLq+Le+qL+++lk+iR+kK++l++e+i+elqkk k+l+e+n++L k Kaladp0094s0011.1.p 81 IPTDTESNGSWHLEHARLKARIEALEQKQRHYMGEDLDSLILKELQNLENQLDSALKHIRAKKSQLMFESISELQKKDKQLHEQNTSLAK 170 4466777899******************************************************************************** PP K-box 97 klee 100 +++e Kaladp0094s0011.1.p 171 QMKE 174 9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MGRGRVQMKR IENKINRQVT FSKRRSGLLK KAHEISVLCD AEVALIVFST KGKLFDYATD 60 SCMDRILERH ERYSSAEKQL IPTDTESNGS WHLEHARLKA RIEALEQKQR HYMGEDLDSL 120 ILKELQNLEN QLDSALKHIR AKKSQLMFES ISELQKKDKQ LHEQNTSLAK QMKERENTQG 180 MDQQSHIQPP LEASTGIGGG NYIYQGARDH GGTASSALHL TTTTTTLLPQ WMLMSRLGE* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60910.1 | 8e-93 | MIKC_MADS family protein |