PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0093s0154.5.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | YABBY | ||||||||
Protein Properties | Length: 167aa MW: 18249.7 Da PI: 9.7166 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 182.1 | 3.2e-56 | 2 | 154 | 23 | 169 |
YABBY 23 avsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee....lleelkveeenlksnvekeesastsvssekl....sen 104 vsvP ts++++vtvrCGhC++llsvn+ q + +h+ ++ +++ l ++ +++ n++s ++++s+s+ ++ kl ++ Kaladp0093s0154.5.p 2 EVSVPCTSMLNIVTVRCGHCANLLSVNMGALLQPSSI-QHFPQKQQQTgaegALMTNATNNLNYSSGSSSSSSPSKCNPD-KLsgscLSS 89 69***********************999887755444.444433333311123333333333333333333333333333.335555456 PP YABBY 105 edeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169 e+++ pr ppv ekrqrvPsaynrfikeeiqrikasnP+ishreafsaaaknWahfP+ihfg Kaladp0093s0154.5.p 90 ENNQPPRLPPVRPAMEKRQRVPSAYNRFIKEEIQRIKASNPEISHREAFSAAAKNWAHFPHIHFG 154 677889999976667*************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence |
MEVSVPCTSM LNIVTVRCGH CANLLSVNMG ALLQPSSIQH FPQKQQQTGA EGALMTNATN 60 NLNYSSGSSS SSSPSKCNPD KLSGSCLSSE NNQPPRLPPV RPAMEKRQRV PSAYNRFIKE 120 EIQRIKASNP EISHREAFSA AAKNWAHFPH IHFGMKKAKF LDQDIN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 4e-50 | YABBY family protein |