PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0093s0154.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | YABBY | ||||||||
Protein Properties | Length: 186aa MW: 20374.2 Da PI: 8.9683 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 223.4 | 6.5e-69 | 4 | 173 | 6 | 169 |
YABBY 6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee....lleelkveeenlksnvekees 91 se+vCyv+CnfCnt+l+vsvP ts++++vtvrCGhC++llsvn+ q + +h+ ++ +++ l ++ +++ n++s ++++s Kaladp0093s0154.3.p 4 GSERVCYVHCNFCNTVLVVSVPCTSMLNIVTVRCGHCANLLSVNMGALLQPSSI-QHFPQKQQQTgaegALMTNATNNLNYSSGSSSSSS 92 589***************************************999887755444.44443333331112333333333333333333333 PP YABBY 92 astsvssekl....senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169 +s+ ++ kl ++e+++ pr ppv ekrqrvPsaynrfikeeiqrikasnP+ishreafsaaaknWahfP+ihfg Kaladp0093s0154.3.p 93 PSKCNPD-KLsgscLSSENNQPPRLPPVRPAMEKRQRVPSAYNRFIKEEIQRIKASNPEISHREAFSAAAKNWAHFPHIHFG 173 3333333.335555456677889999976667*************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MEVGSERVCY VHCNFCNTVL VVSVPCTSML NIVTVRCGHC ANLLSVNMGA LLQPSSIQHF 60 PQKQQQTGAE GALMTNATNN LNYSSGSSSS SSPSKCNPDK LSGSCLSSEN NQPPRLPPVR 120 PAMEKRQRVP SAYNRFIKEE IQRIKASNPE ISHREAFSAA AKNWAHFPHI HFGMKKAKFL 180 DQDIN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 3e-62 | YABBY family protein |