PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0093s0154.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | YABBY | ||||||||
Protein Properties | Length: 186aa MW: 20431.2 Da PI: 8.9683 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 228 | 2.4e-70 | 4 | 173 | 6 | 169 |
YABBY 6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesasts 95 se+vCyv+CnfCnt+l+vsvP ts++++vtvrCGhC++llsvn+ q ++ +h+ ++ +++ +e +++++ + ++ s+s+s Kaladp0093s0154.2.p 4 GSERVCYVHCNFCNTVLVVSVPCTSMLNIVTVRCGHCANLLSVNMGALLQP-SSIQHFPQQKQQQTGAEGALMTNATNNLNYSSGSSSSS 92 589****************************************99877654.44555566665555555444444444444444444444 PP YABBY 96 vssekl........senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169 +s+ ++e+++ pr pp +rP ekrqrvPsaynrfikeeiqrikasnP+ishreafsaaaknWahfP+ihfg Kaladp0093s0154.2.p 93 SPSKCNpdklsgscLSSENNQPPRLPP-VRPMEKRQRVPSAYNRFIKEEIQRIKASNPEISHREAFSAAAKNWAHFPHIHFG 173 444332344466654566677788888.9****************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MEVGSERVCY VHCNFCNTVL VVSVPCTSML NIVTVRCGHC ANLLSVNMGA LLQPSSIQHF 60 PQQKQQQTGA EGALMTNATN NLNYSSGSSS SSSPSKCNPD KLSGSCLSSE NNQPPRLPPV 120 RPMEKRQRVP SAYNRFIKEE IQRIKASNPE ISHREAFSAA AKNWAHFPHI HFGMKKAKFL 180 DQDIN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 2e-64 | YABBY family protein |