PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0093s0154.12.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | YABBY | ||||||||
Protein Properties | Length: 187aa MW: 20502.3 Da PI: 8.9683 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 224.2 | 3.6e-69 | 4 | 174 | 6 | 169 |
YABBY 6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesast 94 se+vCyv+CnfCnt+l+vsvP ts++++vtvrCGhC++llsvn+ q ++ +h+ ++ +++ +e +++++ + ++ s+s+ Kaladp0093s0154.12.p 4 GSERVCYVHCNFCNTVLVVSVPCTSMLNIVTVRCGHCANLLSVNMGALLQP-SSIQHFPQQKQQQTGAEGALMTNATNNLNYSSGSSSS 91 589****************************************99877654.4455556666555555544444444444444444444 PP YABBY 95 svssekl........senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169 s +s+ ++e+++ pr ppv ekrqrvPsaynrfikeeiqrikasnP+ishreafsaaaknWahfP+ihfg Kaladp0093s0154.12.p 92 SSPSKCNpdklsgscLSSENNQPPRLPPVRPAMEKRQRVPSAYNRFIKEEIQRIKASNPEISHREAFSAAAKNWAHFPHIHFG 174 444433234446665456777889999976667*************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence |
MEVGSERVCY VHCNFCNTVL VVSVPCTSML NIVTVRCGHC ANLLSVNMGA LLQPSSIQHF 60 PQQKQQQTGA EGALMTNATN NLNYSSGSSS SSSPSKCNPD KLSGSCLSSE NNQPPRLPPV 120 RPAMEKRQRV PSAYNRFIKE EIQRIKASNP EISHREAFSA AAKNWAHFPH IHFGMKKAKF 180 LDQDIN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 6e-63 | YABBY family protein |