PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0093s0154.10.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | YABBY | ||||||||
Protein Properties | Length: 168aa MW: 18377.8 Da PI: 9.7166 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 182.9 | 1.7e-56 | 2 | 155 | 23 | 169 |
YABBY 23 avsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssekl........se 103 vsvP ts++++vtvrCGhC++llsvn+ q ++ +h+ ++ +++ +e +++++ + ++ s+s+s +s+ + Kaladp0093s0154.10.p 2 EVSVPCTSMLNIVTVRCGHCANLLSVNMGALLQP-SSIQHFPQQKQQQTGAEGALMTNATNNLNYSSGSSSSSSPSKCNpdklsgscLS 89 69************************99877654.445555666655555554444444444444444444444443323444666545 PP YABBY 104 nedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169 +e+++ pr ppv ekrqrvPsaynrfikeeiqrikasnP+ishreafsaaaknWahfP+ihfg Kaladp0093s0154.10.p 90 SENNQPPRLPPVRPAMEKRQRVPSAYNRFIKEEIQRIKASNPEISHREAFSAAAKNWAHFPHIHFG 155 6777889999976667*************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
MEVSVPCTSM LNIVTVRCGH CANLLSVNMG ALLQPSSIQH FPQQKQQQTG AEGALMTNAT 60 NNLNYSSGSS SSSSPSKCNP DKLSGSCLSS ENNQPPRLPP VRPAMEKRQR VPSAYNRFIK 120 EEIQRIKASN PEISHREAFS AAAKNWAHFP HIHFGMKKAK FLDQDIN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 1e-50 | YABBY family protein |