PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0093s0005.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 240aa MW: 27435.2 Da PI: 9.401 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93 | 1.4e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr g++KKA+E+SvLC+aeva+i++s++gkl++y+s Kaladp0093s0005.1.p 9 KRIENKINRQVTFSKRRSGLMKKAHEISVLCEAEVALIVYSTKGKLFDYAS 59 79***********************************************86 PP | |||||||
2 | K-box | 95.9 | 6.1e-32 | 83 | 174 | 9 | 100 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++ + + s+++++akL+++ie Lqr+qR+l+GedL++Lsl+eLq+Le+qLe++lk+iR kKn+l+ ++i el kk k++qe+n+ L kk+ Kaladp0093s0005.1.p 83 TDLTSNGSWTHQHAKLQNRIEVLQRNQRNLMGEDLDPLSLRELQNLEHQLENALKHIRLKKNQLMNQSIAELHKKDKAMQEQNNLLGKKI 172 44556689*********************************************************************************9 PP K-box 99 ee 100 +e Kaladp0093s0005.1.p 173 KE 174 86 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 240 aa Download sequence |
MGRGRVQLKR IENKINRQVT FSKRRSGLMK KAHEISVLCE AEVALIVYST KGKLFDYASD 60 SSMERILERY ERYSTSDQQL LSTDLTSNGS WTHQHAKLQN RIEVLQRNQR NLMGEDLDPL 120 SLRELQNLEH QLENALKHIR LKKNQLMNQS IAELHKKDKA MQEQNNLLGK KIKEREKALA 180 EHGQLDHQSQ DPSPPPTQTL EPIMRCVDIN RDINQGEGST DQSHPSTALP PWMLGGPTI* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G60910.1 | 1e-91 | MIKC_MADS family protein |