PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0092s0079.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 366aa    MW: 38854 Da    PI: 7.4877
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0092s0079.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.90.0014280300121
                          EEETTTTEEESSHHHHHHHHH CS
              zf-C2H2   1 ykCpdCgksFsrksnLkrHir 21 
                          ++C++C+k+Fs+   L  H+r
  Kaladp0092s0079.1.p 280 HSCTICSKVFSSGQALGGHMR 300
                          79************9999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    
MNHQSEFHYL SPPPLQQVQP DFPALPPPLE PPPATVFLSE GLTQKQRKKR TKLVPVDSPA  60
SSSGVQKKRY IKPDPAAPKI TRPCSECGKK FWSWKALFGH MRCHPERQWR GINPPPSAAR  120
RSMEGMEVVA AAAPSASAAA GAASSMSMTE EDHEVAACLL LLANGGHAAE FPRLEAACPD  180
TEYESAIVVR HVADAEGAGS AADASETNCK FECSCCKKVF GSHQALGGHR ASHKNVKGCF  240
ANTRPDGEEE GRCAGLGCSS AEPPLPPPGP SSSMALILRH SCTICSKVFS SGQALGGHMR  300
CHWEKMDEPH STHFAPLTPQ CTTSNNPLPT ATASQALDLN MPAPLDHEAS SSSSSGLRLD  360
LRLGL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35280.19e-68C2H2 family protein