PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0092s0025.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 274aa MW: 30126 Da PI: 8.4949

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0092s0025.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.4	2.5e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++ +G g+W++ ++ g+ R++k+c++rw +yl Kaladp0092s0025.1.p 14 KGAWTKEEDGRLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWMNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	58.7	1.3e-18	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+eEdel++d++ +lG++ W++Ia +++ gRt++++k++w+++ Kaladp0092s0025.1.p 67 RGNFTEEEDELIIDLHGLLGNK-WSLIAGKLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MGRSPCCEKA HTNKGAWTKE EDGRLVAYIR AHGEGCWRSL PKAAGLLRCG KSCRLRWMNY 60 LRPDLKRGNF TEEEDELIID LHGLLGNKWS LIAGKLPGRT DNEIKNYWNT HIKRKLLNRG 120 IDPASHRSIT QPSASPSPDS HAPAAATDSH PTTTATISFS APAKPMANTI KQEDDRLQFS 180 STSFIPISKQ EDQIQTQSHT DLNLELRISP PYQQLSDPHP QQLQINTGSR QLCFSCSLGL 240 RSGEECDCSA GNGSRGSVVM GSVGNDFLGL KMK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	2e-95	MYB family protein