PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0091s0061.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 1197aa MW: 134901 Da PI: 8.2632

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0091s0061.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.9	0.00034	1080	1105	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y+C C+++F++k +L H r+ + Kaladp0091s0061.2.p 1080 YQCDmeGCTMTFNSKQELLLHKRNiC 1105 99********************9877 PP
2	zf-C2H2	14.4	0.00011	1105	1127	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk F ++ +L++H r+H Kaladp0091s0061.2.p 1105 CPvkGCGKKFISHKYLVQHKRVH 1127 9999*****************99 PP
3	zf-C2H2	11.2	0.0012	1163	1189	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y C Cg++F+ s++ rH r+ H Kaladp0091s0061.2.p 1163 YICAepGCGQTFRFVSDFSRHKRKtgH 1189 789999****************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1197 aa Download sequence
MEKGGAEHQG QGQAGQREVF QWLKTLPQAP EYRPTLAEFH DPVSYIFKIE KEASRYGICK 60 IIPPVPPQLK KTSLANLNRS LAARAPDSAP AFATRQQQIG FCPRKSRPVQ RPVWQSGERY 120 TVQEFEAKAK VFEKNYLKRV GKRAGLSALE METLYWKASL DKPFTVEYAN DMPGSAFVQM 180 KPDRKWRETG DGVNVGETAW NMRGVSRSNL SLLRFLKEEI PGVTSPMLYI AMMFSWFAWH 240 AEDHDMHSLN YLHLGASKTW YGVPKDAAAA FEEVVRVQGY GGEINPLVTF ATLGEKTTIM 300 SPEIFIKAGI PCCRTSSINH GPRSSRLKDK RKSEGETVVK ELFIQDVLQN NDQLYLLAQG 360 SCVVTLPESA SGFSISLQSS NRSLIDEKSS LTTGFCSQKE ETSASKGVIS CGFGRQKSRK 420 SLKNNVNFSV GGNLCSVSER SKPTLNSGES YPSSHTSNRW VTDQRVFSCV ACGILCFPCI 480 AIIQPSEAAK KYIMSADHSV FHDGIIPSGT TSDGLAVTGK DNINDMNFSS RWREKSPRSS 540 SYEFQEKNES DEVTSEIEEQ PEAIGALGLL ASTYANSSDS EHEQFETDSP VLADGPNFSK 600 VSADSDFEFD DAPDHKQEHD DETNAEHSLS SSKFHIEDEH ALLNTVSYQE NEQGGSFVDN 660 HHRYTYLDGP NEFPSDSITK SDSVNHIASK AKRTGYPRLY HNSSRMHIFC LEHAVEIESQ 720 LQKIGGAHML LLCHPDYPRI EIEAKMIAEE LGLYEHWNDI AFRDATKEDE ECIQTVLEND 780 KGTPRNGDWA VKLGIDLLYS VNLSRSSLYS KQMPFNSIIY NAFGRVPPGE DALTPKMGKG 840 VGNKQKRIKL AGKWCGKVWM SNQVHPLLIP RDQEEPEEDT IINDWPESDP DDTFNVNPNY 900 ACLDEPDTVT DKFGTKRKIV VYSRSNKRAK VAEKMDPIGS PDQAGCSTQR RPVRMVRSRY 960 MKIEGSEDTK PLDKQKQGLT QLISHDEDFE VGPRTRIRKR NPKFEEDFEA ERPLRKLVYS 1020 RKASKTPSQK RPVRSNEANM KMEPASRSKS IRNEEAPRPR ISPNGDALRP RKLNGEEAAY 1080 QCDMEGCTMT FNSKQELLLH KRNICPVKGC GKKFISHKYL VQHKRVHVDD RPLKCPWKGC 1140 KMAFKWAWAR TEHIRVHTGV RPYICAEPGC GQTFRFVSDF SRHKRKTGHS TKKVRK*

Sequence ? help Back to Top

Protein Sequence Length: 1197 aa Download sequence

MEKGGAEHQG QGQAGQREVF QWLKTLPQAP EYRPTLAEFH DPVSYIFKIE KEASRYGICK  60
IIPPVPPQLK KTSLANLNRS LAARAPDSAP AFATRQQQIG FCPRKSRPVQ RPVWQSGERY  120
TVQEFEAKAK VFEKNYLKRV GKRAGLSALE METLYWKASL DKPFTVEYAN DMPGSAFVQM  180
KPDRKWRETG DGVNVGETAW NMRGVSRSNL SLLRFLKEEI PGVTSPMLYI AMMFSWFAWH  240
AEDHDMHSLN YLHLGASKTW YGVPKDAAAA FEEVVRVQGY GGEINPLVTF ATLGEKTTIM  300
SPEIFIKAGI PCCRTSSINH GPRSSRLKDK RKSEGETVVK ELFIQDVLQN NDQLYLLAQG  360
SCVVTLPESA SGFSISLQSS NRSLIDEKSS LTTGFCSQKE ETSASKGVIS CGFGRQKSRK  420
SLKNNVNFSV GGNLCSVSER SKPTLNSGES YPSSHTSNRW VTDQRVFSCV ACGILCFPCI  480
AIIQPSEAAK KYIMSADHSV FHDGIIPSGT TSDGLAVTGK DNINDMNFSS RWREKSPRSS  540
SYEFQEKNES DEVTSEIEEQ PEAIGALGLL ASTYANSSDS EHEQFETDSP VLADGPNFSK  600
VSADSDFEFD DAPDHKQEHD DETNAEHSLS SSKFHIEDEH ALLNTVSYQE NEQGGSFVDN  660
HHRYTYLDGP NEFPSDSITK SDSVNHIASK AKRTGYPRLY HNSSRMHIFC LEHAVEIESQ  720
LQKIGGAHML LLCHPDYPRI EIEAKMIAEE LGLYEHWNDI AFRDATKEDE ECIQTVLEND  780
KGTPRNGDWA VKLGIDLLYS VNLSRSSLYS KQMPFNSIIY NAFGRVPPGE DALTPKMGKG  840
VGNKQKRIKL AGKWCGKVWM SNQVHPLLIP RDQEEPEEDT IINDWPESDP DDTFNVNPNY  900
ACLDEPDTVT DKFGTKRKIV VYSRSNKRAK VAEKMDPIGS PDQAGCSTQR RPVRMVRSRY  960
MKIEGSEDTK PLDKQKQGLT QLISHDEDFE VGPRTRIRKR NPKFEEDFEA ERPLRKLVYS  1020
RKASKTPSQK RPVRSNEANM KMEPASRSKS IRNEEAPRPR ISPNGDALRP RKLNGEEAAY  1080
QCDMEGCTMT FNSKQELLLH KRNICPVKGC GKKFISHKYL VQHKRVHVDD RPLKCPWKGC  1140
KMAFKWAWAR TEHIRVHTGV RPYICAEPGC GQTFRFVSDF SRHKRKTGHS TKKVRK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	1e-147	C2H2 family protein