PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0091s0061.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 1270aa MW: 143018 Da PI: 8.2988

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0091s0061.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.8	0.00036	1153	1178	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y+C C+++F++k +L H r+ + Kaladp0091s0061.1.p 1153 YQCDmeGCTMTFNSKQELLLHKRNiC 1178 99********************9877 PP
2	zf-C2H2	14.3	0.00012	1178	1200	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk F ++ +L++H r+H Kaladp0091s0061.1.p 1178 CPvkGCGKKFISHKYLVQHKRVH 1200 9999*****************99 PP
3	zf-C2H2	11.1	0.0012	1236	1262	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y C Cg++F+ s++ rH r+ H Kaladp0091s0061.1.p 1236 YICAepGCGQTFRFVSDFSRHKRKtgH 1262 789999****************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1270 aa Download sequence
MEKGGAEHQG QGQAGQREVF QWLKTLPQAP EYRPTLAEFH DPVSYIFKIE KEASRYGICK 60 IIPPVPPQLK KTSLANLNRS LAARAPDSAP AFATRQQQIG FCPRKSRPVQ RPVWQSGERY 120 TVQEFEAKAK VFEKNYLKRV GKRAGLSALE METLYWKASL DKPFTVEYAN DMPGSAFVQM 180 KPDRKWRETG DGVNVGETAW NMRGVSRSNL SLLRFLKEEI PGVTSPMLYI AMMFSWFAWH 240 AEDHDMHSLN YLHLGASKTW YGVPKDAAAA FEEVVRVQGY GGEINPLVTF ATLGEKTTIM 300 SPEIFIKAGI PCCRLVQNPG EFVVTFPRAY HTGFSHGFNV GEAANFATPE WLRVAKEAAI 360 RRASVNFPPM LSHAQLLYDL VFALCSRTSS INHGPRSSRL KDKRKSEGET VVKELFIQDV 420 LQNNDQLYLL AQGSCVVTLP ESASGFSISL QSSNRSLIDE KSSLTTGFCS QKEETSASKG 480 VISCGFGRQK SRKSLKNNVN FSVGGNLCSV SERSKPTLNS GESYPSSHTS NRWVTDQRVF 540 SCVACGILCF PCIAIIQPSE AAKKYIMSAD HSVFHDGIIP SGTTSDGLAV TGKDNINDMN 600 FSSRWREKSP RSSSYEFQEK NESDEVTSEI EEQPEAIGAL GLLASTYANS SDSEHEQFET 660 DSPVLADGPN FSKVSADSDF EFDDAPDHKQ EHDDETNAEH SLSSSKFHIE DEHALLNTVS 720 YQENEQGGSF VDNHHRYTYL DGPNEFPSDS ITKSDSVNHI ASKAKRTGYP RLYHNSSRMH 780 IFCLEHAVEI ESQLQKIGGA HMLLLCHPDY PRIEIEAKMI AEELGLYEHW NDIAFRDATK 840 EDEECIQTVL ENDKGTPRNG DWAVKLGIDL LYSVNLSRSS LYSKQMPFNS IIYNAFGRVP 900 PGEDALTPKM GKGVGNKQKR IKLAGKWCGK VWMSNQVHPL LIPRDQEEPE EDTIINDWPE 960 SDPDDTFNVN PNYACLDEPD TVTDKFGTKR KIVVYSRSNK RAKVAEKMDP IGSPDQAGCS 1020 TQRRPVRMVR SRYMKIEGSE DTKPLDKQKQ GLTQLISHDE DFEVGPRTRI RKRNPKFEED 1080 FEAERPLRKL VYSRKASKTP SQKRPVRSNE ANMKMEPASR SKSIRNEEAP RPRISPNGDA 1140 LRPRKLNGEE AAYQCDMEGC TMTFNSKQEL LLHKRNICPV KGCGKKFISH KYLVQHKRVH 1200 VDDRPLKCPW KGCKMAFKWA WARTEHIRVH TGVRPYICAE PGCGQTFRFV SDFSRHKRKT 1260 GHSTKKVRK*

Sequence ? help Back to Top

Protein Sequence Length: 1270 aa Download sequence

MEKGGAEHQG QGQAGQREVF QWLKTLPQAP EYRPTLAEFH DPVSYIFKIE KEASRYGICK  60
IIPPVPPQLK KTSLANLNRS LAARAPDSAP AFATRQQQIG FCPRKSRPVQ RPVWQSGERY  120
TVQEFEAKAK VFEKNYLKRV GKRAGLSALE METLYWKASL DKPFTVEYAN DMPGSAFVQM  180
KPDRKWRETG DGVNVGETAW NMRGVSRSNL SLLRFLKEEI PGVTSPMLYI AMMFSWFAWH  240
AEDHDMHSLN YLHLGASKTW YGVPKDAAAA FEEVVRVQGY GGEINPLVTF ATLGEKTTIM  300
SPEIFIKAGI PCCRLVQNPG EFVVTFPRAY HTGFSHGFNV GEAANFATPE WLRVAKEAAI  360
RRASVNFPPM LSHAQLLYDL VFALCSRTSS INHGPRSSRL KDKRKSEGET VVKELFIQDV  420
LQNNDQLYLL AQGSCVVTLP ESASGFSISL QSSNRSLIDE KSSLTTGFCS QKEETSASKG  480
VISCGFGRQK SRKSLKNNVN FSVGGNLCSV SERSKPTLNS GESYPSSHTS NRWVTDQRVF  540
SCVACGILCF PCIAIIQPSE AAKKYIMSAD HSVFHDGIIP SGTTSDGLAV TGKDNINDMN  600
FSSRWREKSP RSSSYEFQEK NESDEVTSEI EEQPEAIGAL GLLASTYANS SDSEHEQFET  660
DSPVLADGPN FSKVSADSDF EFDDAPDHKQ EHDDETNAEH SLSSSKFHIE DEHALLNTVS  720
YQENEQGGSF VDNHHRYTYL DGPNEFPSDS ITKSDSVNHI ASKAKRTGYP RLYHNSSRMH  780
IFCLEHAVEI ESQLQKIGGA HMLLLCHPDY PRIEIEAKMI AEELGLYEHW NDIAFRDATK  840
EDEECIQTVL ENDKGTPRNG DWAVKLGIDL LYSVNLSRSS LYSKQMPFNS IIYNAFGRVP  900
PGEDALTPKM GKGVGNKQKR IKLAGKWCGK VWMSNQVHPL LIPRDQEEPE EDTIINDWPE  960
SDPDDTFNVN PNYACLDEPD TVTDKFGTKR KIVVYSRSNK RAKVAEKMDP IGSPDQAGCS  1020
TQRRPVRMVR SRYMKIEGSE DTKPLDKQKQ GLTQLISHDE DFEVGPRTRI RKRNPKFEED  1080
FEAERPLRKL VYSRKASKTP SQKRPVRSNE ANMKMEPASR SKSIRNEEAP RPRISPNGDA  1140
LRPRKLNGEE AAYQCDMEGC TMTFNSKQEL LLHKRNICPV KGCGKKFISH KYLVQHKRVH  1200
VDDRPLKCPW KGCKMAFKWA WARTEHIRVH TGVRPYICAE PGCGQTFRFV SDFSRHKRKT  1260
GHSTKKVRK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	0.0	C2H2 family protein