PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0090s0076.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 508aa MW: 55642.6 Da PI: 6.6935

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0090s0076.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.3	0.00025	93	110	2	19
EETTTTEEESSHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrH 19 +C++Cgk Fs++ ++ H Kaladp0090s0076.1.p 93 SCENCGKEFSSWKSFLEH 110 6**************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 508 aa Download sequence
MACSPHHDHH EQNFKHFCKI CKKGFGCGRA LGGHMRAHGI GDESGLMDDD EDEDQISDWE 60 DKLAETSNPA SPPVNKRMYS LRTNPNRLKT CRSCENCGKE FSSWKSFLEH GKCGGESEDD 120 AESPVSSPES ESGVRRGMGW SKRKSSLRAN FGNFNSSCPS SEEEDLAHCL MMLSSATVDH 180 SYQAEPDHES CASASKDDQL NNSMMRSFVA PNRISIGIKA KSIATKGLFE CKACKKVFNS 240 HQALGGHRAS HKKVKGCFAA RLDDNHRPPP ADEETMLNNS EDDEQQFTGI PVSKVNTPYS 300 LQLATNSSSL TAAHHFAPSS SKRKSKVHEC SICHRVFSSG QALGGHKRCH WITSNNGGQD 360 PTLLSKFAHF DHHLASKLAQ TGPIDLNLPA TSDMNHRREA DKQQPVTRNA LSFELSAENY 420 FLQINELKGN DEVMMMITSN QKNNNNQCHN NNVEEDDADS KVRLAKLSEL KDMKVGGEGS 480 SSSWLQVGLA SSTTDNVVAI GDDNTAG*

Sequence ? help Back to Top

Protein Sequence Length: 508 aa Download sequence

MACSPHHDHH EQNFKHFCKI CKKGFGCGRA LGGHMRAHGI GDESGLMDDD EDEDQISDWE  60
DKLAETSNPA SPPVNKRMYS LRTNPNRLKT CRSCENCGKE FSSWKSFLEH GKCGGESEDD  120
AESPVSSPES ESGVRRGMGW SKRKSSLRAN FGNFNSSCPS SEEEDLAHCL MMLSSATVDH  180
SYQAEPDHES CASASKDDQL NNSMMRSFVA PNRISIGIKA KSIATKGLFE CKACKKVFNS  240
HQALGGHRAS HKKVKGCFAA RLDDNHRPPP ADEETMLNNS EDDEQQFTGI PVSKVNTPYS  300
LQLATNSSSL TAAHHFAPSS SKRKSKVHEC SICHRVFSSG QALGGHKRCH WITSNNGGQD  360
PTLLSKFAHF DHHLASKLAQ TGPIDLNLPA TSDMNHRREA DKQQPVTRNA LSFELSAENY  420
FLQINELKGN DEVMMMITSN QKNNNNQCHN NNVEEDDADS KVRLAKLSEL KDMKVGGEGS  480
SSSWLQVGLA SSTTDNVVAI GDDNTAG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35280.1	1e-26	C2H2 family protein