PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0089s0043.3.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 425aa MW: 46386.5 Da PI: 6.5072

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0089s0043.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32	2.2e-10	271	319	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + +k Ka +L + ++Y++sLq Kaladp0089s0043.3.p 271 NSHSLAERVRREKISERMKLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 319 58************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
MGVGGDGEVD LGFHQNSNKG FMSCSTSGMN TNPVPNKAAG TAMSSIPMFK SSAGSDPFFG 60 THWDPLLAIN HSENFGGGSS MVSHCGYANP PYPIHNQGMS STHLVQYPSS DSTLVDLPKI 120 QHFGSGNFSD MAGLYGLPAL GATGTSSCYQ NYLPNQEVVT HRHHNTDGAR SQDDCQVSEE 180 RALEASPNGK RRRRSIESAS ELNSNKVTEG EQQKDMSEGS FDQPGEPDDK KQSQILKNKP 240 SSKQAKNNSP TEENTKDTYI HVRARRGQAT NSHSLAERVR REKISERMKL LQELVPGCNK 300 ITGKAVMLDE IINYVQSLQQ QVEFLSMKLA TVNPELDIDI ERMLSKDILQ SRGDNTVMLG 360 ISPGIRNSHP YPHAMLQSGM QNSATEYHHM PQNGWNNELQ SLLQMGFCSN PAVDNQGLDG 420 CSKP*

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

MGVGGDGEVD LGFHQNSNKG FMSCSTSGMN TNPVPNKAAG TAMSSIPMFK SSAGSDPFFG  60
THWDPLLAIN HSENFGGGSS MVSHCGYANP PYPIHNQGMS STHLVQYPSS DSTLVDLPKI  120
QHFGSGNFSD MAGLYGLPAL GATGTSSCYQ NYLPNQEVVT HRHHNTDGAR SQDDCQVSEE  180
RALEASPNGK RRRRSIESAS ELNSNKVTEG EQQKDMSEGS FDQPGEPDDK KQSQILKNKP  240
SSKQAKNNSP TEENTKDTYI HVRARRGQAT NSHSLAERVR REKISERMKL LQELVPGCNK  300
ITGKAVMLDE IINYVQSLQQ QVEFLSMKLA TVNPELDIDI ERMLSKDILQ SRGDNTVMLG  360
ISPGIRNSHP YPHAMLQSGM QNSATEYHHM PQNGWNNELQ SLLQMGFCSN PAVDNQGLDG  420
CSKP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	4e-78	bHLH family protein