PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0088s0066.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

SBP

Protein Properties

Length: 445aa MW: 48862.3 Da PI: 8.2643

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0088s0066.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	128.8	2e-40	173	250	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC++dls k+yhr+h++Ce hsk+p+v+v gle+rfCqqCsrfh+lsefDe+krsCr+rL++hn+rrrk+++ Kaladp0088s0066.1.p 173 RCQVEGCNVDLSGSKDYHRKHRICESHSKCPKVIVGGLERRFCQQCSRFHKLSEFDEKKRSCRKRLSDHNARRRKPRS 250 6**************************************************************************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MWDTGSSLQF DWENLVMLDG KGNQVPLKLN SSVWGSDIDG IHLHSHACDF GSINRFSGLD 60 AAHVSSVSSK STSADSSSLG KTSIISVFDE SRSVSIAVDF AKSKNPAAAS SVSVEASGGS 120 VEPVIGLKLG KRTYFEDFCS ASNAKTLTVS DKPLSSASSR RSRSSHQTMQ SLRCQVEGCN 180 VDLSGSKDYH RKHRICESHS KCPKVIVGGL ERRFCQQCSR FHKLSEFDEK KRSCRKRLSD 240 HNARRRKPRS EARHFNLDGK QQVGFVFNMP PYHQARPTSS PWETCGSKFT LTRDYYPFSE 300 KRTAGADHHQ YLLGNRISNT ISIQSYNNEG SPSKCATHEF LDDGAGECIT PSNIAAAQDL 360 RSAPSLLSTN GMGSCNSDPV PIYHQPNNVF QQPETRAVLH LASPQMWGSE PHPSDSPAPL 420 VGLQSNLRPY SETFDLSFGE NQQY*

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MWDTGSSLQF DWENLVMLDG KGNQVPLKLN SSVWGSDIDG IHLHSHACDF GSINRFSGLD  60
AAHVSSVSSK STSADSSSLG KTSIISVFDE SRSVSIAVDF AKSKNPAAAS SVSVEASGGS  120
VEPVIGLKLG KRTYFEDFCS ASNAKTLTVS DKPLSSASSR RSRSSHQTMQ SLRCQVEGCN  180
VDLSGSKDYH RKHRICESHS KCPKVIVGGL ERRFCQQCSR FHKLSEFDEK KRSCRKRLSD  240
HNARRRKPRS EARHFNLDGK QQVGFVFNMP PYHQARPTSS PWETCGSKFT LTRDYYPFSE  300
KRTAGADHHQ YLLGNRISNT ISIQSYNNEG SPSKCATHEF LDDGAGECIT PSNIAAAQDL  360
RSAPSLLSTN GMGSCNSDPV PIYHQPNNVF QQPETRAVLH LASPQMWGSE PHPSDSPAPL  420
VGLQSNLRPY SETFDLSFGE NQQY*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	230	247	KKRSCRKRLSDHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	9e-58	SBP family protein