PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0088s0045.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | NAC | ||||||||
Protein Properties | Length: 234aa MW: 25981.7 Da PI: 9.3817 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 158.5 | 2.8e-49 | 16 | 140 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 lppG+rF+Ptdeelv +yL+kk+ + +l++ ++i+ev+++k++PwdLp +++ yfFs+r+ ky++g+r+nrat sgyWkatg d+ Kaladp0088s0045.1.p 16 LPPGVRFQPTDEELVFQYLAKKIFHLPLPA-SIIPEVEVCKSDPWDLPG---DKSETRYFFSSREAKYPNGSRSNRATGSGYWKATGIDR 101 79****************************.89***************2...345677******************************** PP NAM 91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++++ ++++ glkktLvfy+g+ +kg++tdW+mheyrl Kaladp0088s0045.1.p 102 KIMCRgRNQVGGLKKTLVFYQGKPNKGTRTDWIMHEYRL 140 ****95556678*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MENQVAIVMN GVVVRLPPGV RFQPTDEELV FQYLAKKIFH LPLPASIIPE VEVCKSDPWD 60 LPGDKSETRY FFSSREAKYP NGSRSNRATG SGYWKATGID RKIMCRGRNQ VGGLKKTLVF 120 YQGKPNKGTR TDWIMHEYRL DSALADLLMK RSAGPQAAVT AQIEKWVLCR IFLKKRAGGD 180 ANKLTDEVRR GLARPILCDL NEAPTSSSCG SSGLTDESLN NEAEVESSHV SRY* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 4e-78 | NAC family protein |