PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0085s0129.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

HRT-like

Protein Properties

Length: 401aa MW: 45622.6 Da PI: 9.8705

Description

HRT-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0085s0129.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HRT-like	57.8	1.8e-18	288	318	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGviledG++C++ Pv+ RKRC+eHKG+Ri Kaladp0085s0129.1.p 288 ICGVILEDGTPCRKLPVPTRKRCQEHKGRRI 318 8*****************************7 PP
2	HRT-like	42.6	1e-13	357	386	2	31
HRT-like 2 CGviledGsvCkrqPvkgRKRCeeHKGmRi 31 C v l+dG C+rqP gRKRC+eHKGm++ Kaladp0085s0129.1.p 357 CAVELGDGKKCSRQPNVGRKRCQEHKGMKV 386 99**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MDINNTSTEI QKRIRWPVLI GSMTTIYNMI LIGPSDWEDH SLGKEGATRY RIHNLPKGFE 60 PGVYELGIAV SHSGLGRDIR KLDPTRIVVV YLGQAGNVRS RLQSYGQSGS HLVQKNPISK 120 SNCHWDDNIQ NGSGLFDDIF SRGYPIVFRW APMASKKEAV ETEARLLEKF DYAWNKEYNN 180 ARRPDDIYKK LDKVAASTIW FSKITRILQK KVGIRIKSSN HHPIRQDNQP KSIRHNHLFS 240 GVLNFSRSRP RYNLGNPDTG DSSCELNCYY EPETGDMENS PGKVGLQICG VILEDGTPCR 300 KLPVPTRKRC QEHKGRRIHV MYNAIREENI ASTIREEKNN ANVEHNTQNN QDQRSACAVE 360 LGDGKKCSRQ PNVGRKRCQE HKGMKVNSLV TKQDKFNNSY *

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MDINNTSTEI QKRIRWPVLI GSMTTIYNMI LIGPSDWEDH SLGKEGATRY RIHNLPKGFE  60
PGVYELGIAV SHSGLGRDIR KLDPTRIVVV YLGQAGNVRS RLQSYGQSGS HLVQKNPISK  120
SNCHWDDNIQ NGSGLFDDIF SRGYPIVFRW APMASKKEAV ETEARLLEKF DYAWNKEYNN  180
ARRPDDIYKK LDKVAASTIW FSKITRILQK KVGIRIKSSN HHPIRQDNQP KSIRHNHLFS  240
GVLNFSRSRP RYNLGNPDTG DSSCELNCYY EPETGDMENS PGKVGLQICG VILEDGTPCR  300
KLPVPTRKRC QEHKGRRIHV MYNAIREENI ASTIREEKNN ANVEHNTQNN QDQRSACAVE  360
LGDGKKCSRQ PNVGRKRCQE HKGMKVNSLV TKQDKFNNSY *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56780.1	2e-73	HRT-like family protein