PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0084s0050.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 292aa    MW: 33279.1 Da    PI: 5.5589
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0084s0050.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding574.5e-18855148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g+W+++Ede+l+ ++ ++G g+W++ ar+ g++Rt+k+c++rw+++l
  Kaladp0084s0050.1.p  8 KGPWSEQEDEQLLSYISKYGHGHWEAMARKAGLNRTGKSCRLRWLNHL 55
                         79********************************************97 PP
2Myb_DNA-binding45.81.4e-1461104146
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                          rg+ T +E++++++++ ++G++ W++Ia++++ gR+++++k++w++
  Kaladp0084s0050.1.p  61 RGNITLQEQLIILQLHSRWGNR-WAKIAECLP-GRSDNEIKNYWRT 104
                          7899******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MATGGVKKGP WSEQEDEQLL SYISKYGHGH WEAMARKAGL NRTGKSCRLR WLNHLRPGVR  60
RGNITLQEQL IILQLHSRWG NRWAKIAECL PGRSDNEIKN YWRTRVQKQA KQLRCDVNSH  120
QFIEIVQHVW MPQLAERVQT QCKSSPTITQ ELECCETSSI SCGKLSNDSS NTHSDAAPLS  180
IPCQLSDPSS SHAYNNDSNR HVSDAADSDP AWRLGAGLEA DTYQMNVEKE TISCEDYCPW  240
SEQGLEVDKS QELLETAAWY DHDYCYSLEN LLNDDDMMIL CQQFLFDDHR A*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47190.15e-62MYB family protein