PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0082s0109.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family B3
Protein Properties Length: 244aa    MW: 27248.1 Da    PI: 6.5081
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0082s0109.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.32.7e-131612331894
                          --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                   B3  18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                          +p +f+e++ + + +   ++le ++  +W+v +  r++   +++++GWk+F + +gL +g  ++F+l++ ++  l v
  Kaladp0082s0109.1.p 161 VPPPFIEAYFNFEVR--NVILEAPDRMTWTVVH--RQSAHCIYFASGWKQFYEKHGLTVGGACLFELIRGKGNALQV 233
                          7999***99555455..6***************..888888**************************9877776666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MSGKKDDKSC SCLSTTVNSN IRIDVALSPI SRPKLPSKFV TRFGNQVPIT VTLQVPNDGG  60
VWLIGKGWAE FISSLSLGYA DFLMFEYDAM SVVFHVVVMG MSASEITYPA LATDDDPDDN  120
DDDVKPYSTM REGYNIGDSR ARAFKGNEPH FIISLQPTYL VPPPFIEAYF NFEVRNVILE  180
APDRMTWTVV HRQSAHCIYF ASGWKQFYEK HGLTVGGACL FELIRGKGNA LQVPIYFSNH  240
LRR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.11e-10B3 family protein