PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0081s0001.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 370aa MW: 42324 Da PI: 8.3475

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0081s0001.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.9	4e-06	67	88	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ Cg F+ + +Lk+H+ +H Kaladp0081s0001.1.p 67 TCQECGANFKKPAYLKQHMLSH 88 6*******************99 PP
2	zf-C2H2	15.7	4.3e-05	94	118	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp C+ s++rk++L+rH+ H Kaladp0081s0001.1.p 94 FMCPvdGCHSSYRRKDHLTRHLLQH 118 78*******************9887 PP
3	zf-C2H2	16.7	2e-05	160	184	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C+ Cgk F+ s L++H +H Kaladp0081s0001.1.p 160 HVCQedGCGKAFRFASKLQKHELSH 184 789999***************9998 PP
4	zf-C2H2	15	7e-05	251	275	2	23
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 kC+ C +Fs++snL++H + H Kaladp0081s0001.1.p 251 KCNfeGCLHTFSNRSNLQQHVKAvH 275 699999**************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MEETQQQGEE SAKQPSFRDI RRYYCEYCGV CRSKKSLISM HIIKFHQKEM DENDGEDNIE 60 ETAKTNTCQE CGANFKKPAY LKQHMLSHSV ERPFMCPVDG CHSSYRRKDH LTRHLLQHEG 120 NVFKCSNEKC ARQFVSQANL TRHKCHEPET PFSGCASKQH VCQEDGCGKA FRFASKLQKH 180 ELSHVKLETM EAICLETGCL KYFSNEACLK AHMDACHQHI NCEVCGSKQL KKNLKRHLRT 240 HEPGHANEPV KCNFEGCLHT FSNRSNLQQH VKAVHLNIKR FACGYADCGM KFAYKHVRDN 300 HEKTSHHVYT QGDFLESLEH CRVTPCGGRK RKCPSIASVL VKRITPHPKD SDSTASSMYS 360 AWMNVTNSE*

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MEETQQQGEE SAKQPSFRDI RRYYCEYCGV CRSKKSLISM HIIKFHQKEM DENDGEDNIE  60
ETAKTNTCQE CGANFKKPAY LKQHMLSHSV ERPFMCPVDG CHSSYRRKDH LTRHLLQHEG  120
NVFKCSNEKC ARQFVSQANL TRHKCHEPET PFSGCASKQH VCQEDGCGKA FRFASKLQKH  180
ELSHVKLETM EAICLETGCL KYFSNEACLK AHMDACHQHI NCEVCGSKQL KKNLKRHLRT  240
HEPGHANEPV KCNFEGCLHT FSNRSNLQQH VKAVHLNIKR FACGYADCGM KFAYKHVRDN  300
HEKTSHHVYT QGDFLESLEH CRVTPCGGRK RKCPSIASVL VKRITPHPKD SDSTASSMYS  360
AWMNVTNSE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.2	1e-118	C2H2 family protein