PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0080s0113.4.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MIKC_MADS

Protein Properties

Length: 175aa MW: 19992 Da PI: 10.318

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0080s0113.4.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	85.4	3.4e-27	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+EL +LCdaev v++fsstgkly+++s Kaladp0080s0113.4.p 10 RIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVMVFSSTGKLYDFAS 59 8***********************************************86 PP
2	K-box	82.3	1.1e-27	78	157	8	85
K-box 8 s..leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkek 85 + +++++ + +q+e++ L++++++Lq+++R+l+G+dL+ L +k+Lq+Le+qLeksl++iR++K++ll+++i+el +k Kaladp0080s0113.4.p 78 QlmNSSSEIKFWQREANMLRQQLQSLQETHRQLMGDDLSGLGIKDLQNLENQLEKSLRSIRTTKDQLLIDEIQELNRKVM 157 13468999********************************************************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence
MGRGKVVIRR IDNSTSRQVT FSKRRNGLLK KAKELAILCD AEVGVMVFSS TGKLYDFAST 60 SMKSVIDRYN KSKEDQHQLM NSSSEIKFWQ REANMLRQQL QSLQETHRQL MGDDLSGLGI 120 KDLQNLENQL EKSLRSIRTT KDQLLIDEIQ ELNRKVMLSC KTTNLFVILS STFT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	2e-82	MIKC_MADS family protein