PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0080s0088.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 512aa    MW: 56104 Da    PI: 6.8962
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0080s0088.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.57.4e-30205262260
                          --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                           DgynWrKYGqK+vkg efprsYY+Ct+++C+vkk +er++ d++++e++Y+g+H h+k
  Kaladp0080s0088.1.p 205 TDGYNWRKYGQKHVKGCEFPRSYYKCTHPNCEVKKLLERNH-DGRITEVIYKGTHAHPK 262
                          6***************************************9.***************85 PP
2WRKY1023.4e-32368426159
                          ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                          ldDgy+WrKYGqK+vkg+++prsYY+Ct agCpv+k+ver+ +d k v++tYeg+Hnh+
  Kaladp0080s0088.1.p 368 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCPVRKHVERACHDIKSVITTYEGKHNHD 426
                          59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 512 aa     Download sequence    
MNLTNPHSAS DHLGRSGPHE PRFVPSHTTI PSPPAATEAA DTVVATVSSI PNVSRYKLMS  60
PAKLPISRSM PHTAPPGLSP SSLLDSPVQF CNIKVEPSPT TGTLHKPQPM LGGVGYAAAA  120
STSYANNSAC VGKISDNSEF GTQSQSNFAT GSSLLPSQAF PVTESQQYEL QSQHIEGEKA  180
IQYATASPPD QNEVRLAAVS DNSSTDGYNW RKYGQKHVKG CEFPRSYYKC THPNCEVKKL  240
LERNHDGRIT EVIYKGTHAH PKPQSKRRFP NDSVMGTTDE HLERFSYQSE EMTLGASAAT  300
PDMDGTSEFP SGPPSDEELN DDKYDDDGDD PNSKRRKQDM GVVHFISSVK PIREPRVVVQ  360
TVSEVDILDD GYRWRKYGQK VVKGNPNPRS YYKCTNAGCP VRKHVERACH DIKSVITTYE  420
GKHNHDVPAA KSNNQEASAA AVDPFSSYTA NMGSSSVMQN DSVTQVSARY QLPPDFRNQY  480
PDNEGENFRF ATPYLSSNAY PQNLRSLQMG P*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.12e-94WRKY family protein