PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0079s0184.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 351aa MW: 39831.4 Da PI: 6.673

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0079s0184.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.4	1.2e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ ++ q+G+g +W + ++++g++R++k+c++rw++yl Kaladp0079s0184.1.p 14 KGPWSPEEDAKLKAYIDQHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	35.2	2.9e-11	71	111	4	46
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 + ++Ed l+ + + G++ W+ Ia++++ gRt++++k++w++ Kaladp0079s0184.1.p 71 FAEDEDNLICSLYATIGSR-WSIIAARLP-GRTDNDIKNYWNT 111 5689*************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKAYID QHGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FAEDEDNLIC SLYATIGSRW SIIAARLPGR TDNDIKNYWN TKLKRKLLGK 120 QRKENARRES LLKQQVEKEE SKYQGPQLYM VHANQHEFMS VHFNTQECFS VSSNMLGMPY 180 PNQQVYTYDD RQVDYTYDDR QVDDTNGWAT AINNHQYIQE HLHGEAYNPN INLEYYNSNS 240 GLLSNLESEA EDADPNFLVD GVPINFSSMK KQWFEEFLFR SNQLGFMNMV TGSVSSSSGG 300 EVGTIPKEST TTTWGDRAAT TLMPSSSFQL ADFQQWGSDN NGIHIASIQH *

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDAKLKAYID QHGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FAEDEDNLIC SLYATIGSRW SIIAARLPGR TDNDIKNYWN TKLKRKLLGK  120
QRKENARRES LLKQQVEKEE SKYQGPQLYM VHANQHEFMS VHFNTQECFS VSSNMLGMPY  180
PNQQVYTYDD RQVDYTYDDR QVDDTNGWAT AINNHQYIQE HLHGEAYNPN INLEYYNSNS  240
GLLSNLESEA EDADPNFLVD GVPINFSSMK KQWFEEFLFR SNQLGFMNMV TGSVSSSSGG  300
EVGTIPKEST TTTWGDRAAT TLMPSSSFQL ADFQQWGSDN NGIHIASIQH *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	1e-74	MYB family protein