PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0079s0164.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 231aa MW: 25964.8 Da PI: 8.3149 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 76.6 | 1.9e-24 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g++KKAeEL vLCda+v +++fsstgk ++ys+ Kaladp0079s0164.1.p 9 KKINNVTARQVTFSKRRRGLFKKAEELAVLCDADVGLVVFSSTGKCFDYSN 59 689*********************************************985 PP | |||||||
2 | K-box | 45.2 | 3.9e-16 | 95 | 174 | 20 | 99 |
K-box 20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++++L +e+ + r +R++ GedLe L +++LqqLe+ Le +l++i ++K ++++i el +k +l +enk Lr++++ Kaladp0079s0164.1.p 95 NYTRLSQEVAEKSRLLRRYRGEDLEGLGIEDLQQLEKSLEVGLSHIIETKGGKIMREIVELENKGMRLMKENKVLRHQVA 174 678999999999999**************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MAREKIQLKK INNVTARQVT FSKRRRGLFK KAEELAVLCD ADVGLVVFSS TGKCFDYSNF 60 GMQKILERRH LLSKNLEKLQ QPAPSLELQL VEDVNYTRLS QEVAEKSRLL RRYRGEDLEG 120 LGIEDLQQLE KSLEVGLSHI IETKGGKIMR EIVELENKGM RLMKENKVLR HQVARISDVY 180 IPRGADSAEN KMLEEGQSSE SVTNLCVSGG ASQDHESSDI SLRLGLPYCG * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 1e-96 | MIKC_MADS family protein |