PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0076s0363.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 677aa MW: 73237.9 Da PI: 6.9283

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0076s0363.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.5	0.00022	74	96	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cgk F++ L H+r+H Kaladp0076s0363.1.p 74 HVCTLCGKGFRSGKALGGHMRVH 96 79*******************99 PP
2	zf-C2H2	11.5	0.00096	148	166	3	21
ETTTTEEESSHHHHHHHHH CS zf-C2H2 3 CpdCgksFsrksnLkrHir 21 Cp+C + F+++ L H+r Kaladp0076s0363.1.p 148 CPICRRDFPSNKALFGHMR 166 ******************8 PP
3	zf-C2H2	12.5	0.00044	464	486	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k+Fs++ L H ++H Kaladp0076s0363.1.p 464 YKCTTCNKTFSSHQALGGHKSSH 486 9***************9999988 PP

Sequence ? help Back to Top
Protein Sequence Length: 677 aa Download sequence
MSKDREDRLS RPLPDSEKKT VSMSDREPES GKSRSSATSG GGKLKIKIKL PERRSCESDR 60 IRDQDAVKEE EEEHVCTLCG KGFRSGKALG GHMRVHAKRD RSDQLKTTHH GIDPAAAAVY 120 SSDMYDEEEV KGSCDDELQI KGGRKPICPI CRRDFPSNKA LFGHMRCHPE RTWRGIQPPV 180 YSSSSTVSDD KSDNDGGGDH HFEKGVVDLE KDLLNFGWGA KDRRDREGTV KSFAPSQTGC 240 QIVFGNTSVQ SIAPEQAVGV QSLILLSRGG VDKKRREIKS RPLPAGPGIR DSVNFTRKLK 300 LCGAGAVAAE SRGRADHDSE RGKKRKTSQV LAAEEVSILT DSSDKRFKFA NEKDDEGSAA 360 GVQDLIMESN PLHQLTARRP MVSAADGGAD VISSLDQKDD ATPHGYNAAD LIETKKMQKV 420 RKYLMITDLK PMTGNLPHSS PVNPARCQVV NMEVPVPVPD NERYKCTTCN KTFSSHQALG 480 GHKSSHNKLR NPQSLIRNNE LPHSDNVTAQ VGESSNAEAG ASHNSRIIMA AATHDHAIHQ 540 CNVCFKIYPT GQALGGHKRL HCSLIINKAP PLPAPSNMVI SEPAEAAPLP PPPSIIIPEP 600 AEEAAHSPPA APVAQTSDNV RGALCRFDLN ELPALEDEDD EDVIIQPADN TAAAQPQEEV 660 GDDHAAAHHG PGSPPA*

Sequence ? help Back to Top

Protein Sequence Length: 677 aa Download sequence

MSKDREDRLS RPLPDSEKKT VSMSDREPES GKSRSSATSG GGKLKIKIKL PERRSCESDR  60
IRDQDAVKEE EEEHVCTLCG KGFRSGKALG GHMRVHAKRD RSDQLKTTHH GIDPAAAAVY  120
SSDMYDEEEV KGSCDDELQI KGGRKPICPI CRRDFPSNKA LFGHMRCHPE RTWRGIQPPV  180
YSSSSTVSDD KSDNDGGGDH HFEKGVVDLE KDLLNFGWGA KDRRDREGTV KSFAPSQTGC  240
QIVFGNTSVQ SIAPEQAVGV QSLILLSRGG VDKKRREIKS RPLPAGPGIR DSVNFTRKLK  300
LCGAGAVAAE SRGRADHDSE RGKKRKTSQV LAAEEVSILT DSSDKRFKFA NEKDDEGSAA  360
GVQDLIMESN PLHQLTARRP MVSAADGGAD VISSLDQKDD ATPHGYNAAD LIETKKMQKV  420
RKYLMITDLK PMTGNLPHSS PVNPARCQVV NMEVPVPVPD NERYKCTTCN KTFSSHQALG  480
GHKSSHNKLR NPQSLIRNNE LPHSDNVTAQ VGESSNAEAG ASHNSRIIMA AATHDHAIHQ  540
CNVCFKIYPT GQALGGHKRL HCSLIINKAP PLPAPSNMVI SEPAEAAPLP PPPSIIIPEP  600
AEEAAHSPPA APVAQTSDNV RGALCRFDLN ELPALEDEDD EDVIIQPADN TAAAQPQEEV  660
GDDHAAAHHG PGSPPA*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	273	300	KKRREIKSRPLPAGPGIRDSVNFTRKLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56200.1	7e-18	C2H2 family protein