PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0072s0051.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 518aa MW: 55301 Da PI: 6.7671

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0072s0051.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.6	2.2e-05	66	88	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H Kaladp0072s0051.1.p 66 FVCEICSKGFQRDQNLQLHRRGH 88 89*******************88 PP
2	zf-C2H2	11.9	0.0007	142	164	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +++ Kaladp0072s0051.1.p 142 WKCEKCSKKYAVQSDWKAHSKVC 164 58*****************9877 PP
3	zf-C2H2	11.7	0.00077	172	190	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg++Fsr++++ +H + Kaladp0072s0051.1.p 172 DCGTTFSRRDSFITHRAFC 190 9**************8765 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
MPDDASPMAA ASCEEASVSS SGTQAAQPPP PPSSGVKKRR SLPGMPDPDA EVVALSPKTL 60 MATNRFVCEI CSKGFQRDQN LQLHRRGHNL PWKLRQRTSK EVRKKVYVCP EAGCVHHDPT 120 RALGDLTGIK KHFCRKHGEK KWKCEKCSKK YAVQSDWKAH SKVCGTKEYK CDCGTTFSRR 180 DSFITHRAFC DVLTDERIRV ARTQIPDKNV ADNSNPDEEV EPEVEIPAVA PPSSPSAAPA 240 LNSSANLTGS VLPIQDSDLI WKESETPEEL EDAQPPAATC VTESCSNSMN SNSHGNASTG 300 IYGSLFAPLS TSASVPNETP GFANFVWDVA TPDGITKLAP SMPTEPISLC LSTNHSSAIF 360 RQTVEEPQSY LQQPVMSATA LLQKAAQMGS SSSGSSLLRG LGVVTSLPSR SIQREVLGWN 420 GMHIRSENTS FHASPRLGPE YDASSRFNDF MMGTSSIFEP KPTTLDFLGL GMSAGGGSTG 480 GLSALLTSIE GGLDVSAAAA SYGGSGEYPC KDIGRNS*

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

MPDDASPMAA ASCEEASVSS SGTQAAQPPP PPSSGVKKRR SLPGMPDPDA EVVALSPKTL  60
MATNRFVCEI CSKGFQRDQN LQLHRRGHNL PWKLRQRTSK EVRKKVYVCP EAGCVHHDPT  120
RALGDLTGIK KHFCRKHGEK KWKCEKCSKK YAVQSDWKAH SKVCGTKEYK CDCGTTFSRR  180
DSFITHRAFC DVLTDERIRV ARTQIPDKNV ADNSNPDEEV EPEVEIPAVA PPSSPSAAPA  240
LNSSANLTGS VLPIQDSDLI WKESETPEEL EDAQPPAATC VTESCSNSMN SNSHGNASTG  300
IYGSLFAPLS TSASVPNETP GFANFVWDVA TPDGITKLAP SMPTEPISLC LSTNHSSAIF  360
RQTVEEPQSY LQQPVMSATA LLQKAAQMGS SSSGSSLLRG LGVVTSLPSR SIQREVLGWN  420
GMHIRSENTS FHASPRLGPE YDASSRFNDF MMGTSSIFEP KPTTLDFLGL GMSAGGGSTG  480
GLSALLTSIE GGLDVSAAAA SYGGSGEYPC KDIGRNS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	93	105	KLRQRTSKEVRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	1e-120	C2H2 family protein