PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0071s0396.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 341aa    MW: 38012.5 Da    PI: 7.1551
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0071s0396.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.31.8e-10227275355
                          HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                           +h+ +Er RR++i +++  L+el+P +    +k   Ka++Le+ ++Y++sLq
  Kaladp0071s0396.2.p 227 SSHSLAERARREKISQRMRLLQELVPGC----NKVTGKAAMLEEIINYVQSLQ 275
                          58*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MSDYDASSGS RSQNDRTNNS MKFSCSGWDP FVFMSQSANL GAASSHLAAN QGTSSSFHHH  60
RSSSDAVREL LPCVESLLTC PSEMVGPFGV YPNMEEIAST DCFRRCQPKM GTGSTTMFVC  120
SPTADCADDC EDYGDGPNRR KRNFDSFKVN PPENVGEVEQ QMNHQPGRGS ALRKERNHKK  180
LSIGRHLCDG LDEKQPHSNV KESSQVRKES SKEEYVHVRA RRGQATSSHS LAERARREKI  240
SQRMRLLQEL VPGCNKVTGK AAMLEEIINY VQSLQQQVEL LSMKLAAVNP QLNIHCIEQV  300
VSNDVSCNMT SYLYNQHPAA QFHHWTPDFT DNVLQNLPPM *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.15e-38bHLH family protein