PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0071s0176.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Trihelix
Protein Properties Length: 304aa    MW: 34923.3 Da    PI: 9.2639
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0071s0176.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix82.94.3e-2641124186
             trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                          +W+ qe+++ + +r e+++++ ++k++k lWe +s kmre+gf+rs+ qCk+kw+nl +ryk ++++e ++ s  ++++p++++++
  Kaladp0071s0176.1.p  41 QWSMQETKEFLMIRAELDRTFMETKRNKLLWEVISTKMREKGFNRSADQCKCKWKNLVTRYKGCETMEPDGMS--RQQFPFYSDMQ 124
                          7*********************************************************************954..556******96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MEGRHHHHQH HHLAPQLAGT AGPSATTSME AAASGDSRFP QWSMQETKEF LMIRAELDRT  60
FMETKRNKLL WEVISTKMRE KGFNRSADQC KCKWKNLVTR YKGCETMEPD GMSRQQFPFY  120
SDMQGIFTAR LERALWSEAQ GGAAAAGSSG LARKRALSSS DEDEESDEGD QRTTAMTPTS  180
SNVRKKKKGK VANARSGGVG ELREILGEFM KQQMQMEAQW REAFEAREAE RRAREVEWIR  240
NMEALESERL SMERRWRERQ EQRMLREEAR AEKRDALITC LLNKLRREES SSASHHHQLP  300
PPP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38250.11e-54Trihelix family protein