PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0071s0059.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 455aa MW: 49362 Da PI: 7.1843

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0071s0059.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.1	0.00014	324	346	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C C+k+F ++ L++H +H Kaladp0071s0059.1.p 324 FECLVCHKVFATHPALVKHAGKH 346 89*****************8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MSPDSSMNER ARQLCDRGRS LGGHMRSRVA EAEDAAREAV KLASLCDYSD DEDEEEVEED 60 EQVDDEQVDE DDKDSMVEEA KEKELRPNSK KRDKRAEDSS SGKKFVCVKC GKGFQSQKAM 120 CGHMACHSEK DKSLSTLAAH KSSSKSSWFN PKLVMDSHSD TETGVAAAAA AGPALRRRSK 180 RVKYKSSNGA GGPSAGHNAG PKPNFSVPNY NGGSSVSVVE NEQEEVAKCL MMLSRDSGKW 240 GGLNSVGDSS DLSVKMEDRP GFKVVSGGRI GVRLKRGLDE LAKELRSNDS CNLGAWNNSV 300 QKIDSACTNV VSSRTCAYNE GDKFECLVCH KVFATHPALV KHAGKHSRRS AESDAHSVET 360 NMSPPTPDLR KGKGKMDKSC GSKRVKHECP VCLKAFRSGQ ALGGHKRIHL TSGGLDELRP 420 INEQVPLQDS SSQAHSCIDL NQPAPLEDHE FLPW*

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MSPDSSMNER ARQLCDRGRS LGGHMRSRVA EAEDAAREAV KLASLCDYSD DEDEEEVEED  60
EQVDDEQVDE DDKDSMVEEA KEKELRPNSK KRDKRAEDSS SGKKFVCVKC GKGFQSQKAM  120
CGHMACHSEK DKSLSTLAAH KSSSKSSWFN PKLVMDSHSD TETGVAAAAA AGPALRRRSK  180
RVKYKSSNGA GGPSAGHNAG PKPNFSVPNY NGGSSVSVVE NEQEEVAKCL MMLSRDSGKW  240
GGLNSVGDSS DLSVKMEDRP GFKVVSGGRI GVRLKRGLDE LAKELRSNDS CNLGAWNNSV  300
QKIDSACTNV VSSRTCAYNE GDKFECLVCH KVFATHPALV KHAGKHSRRS AESDAHSVET  360
NMSPPTPDLR KGKGKMDKSC GSKRVKHECP VCLKAFRSGQ ALGGHKRIHL TSGGLDELRP  420
INEQVPLQDS SSQAHSCIDL NQPAPLEDHE FLPW*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	6e-19	C2H2 family protein